Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0102 ATGGAAAATACTGTTCCTCATAGTGTTACCATTCTGTTGTTATTTTTGTTCTGCCTCACCATGACAAAGATAGAAGTCACTTCTCTCTCACATGATGGAGAAGCCCTTCTTTCACTTAAGTCATCACCTTCTGTTCTCTCTTCATGGAACCCTTCAAGCTCAACACCATGTTCATGGAATGGCATAACTTGCTCTCCACAAGGTAGAGTTATTTCTGTCTCTATTCCAGATACTTTTCTTAACATTTCCTATTTGCCTCCTCAACTATCATCTCTATCAATGCTTCAACTTCTCAACCTCTCTTCCACCAATGTTTCTGGCTCCATTCCACCCTCTTTTGGCCAACTATCACATCTTCAACTCCTTGACCTCTCCTCAAACTCTCTCACAGGTTCCATTCCTGATGAACTTGGAAGGCTTTCTTCCCTTCAGTTTCTTTTCTTGAACTCTAACAGATTAACAGGAACCATTCCTCAACATCTTGCTAATCTAACTTCTCTTCAAGTTCTTTGCCTTCAAGACAATCTCCTCAATAGTTCAATCCCATCACAGTTAGGCTCTTTGATATCTCTTCAGCAGTTTAGGATAGGTGGTAATCCATATCTTACAGGACAAATTCCTTCACAGTTAGGCCTACTCTCCAACCTCACCACATTTGGTGCAGCTGCTACTGGACTTTCAGGTTCCATTCCATCTACATTTGGTAACTTGATTAATCTCCAAACATTAGCACTTTATGATACTGAAATTTCTGGTTCAATACCTTATGAACTTGGTTTGTGTTCTGAGTTGAGAAATCTTTATTTGCACATGAATAAGCTCACTGGCTCTATCCCTCCTCACCTGAGTAAGTTGCAAAAACTTACTAGCATGCTCCTTTGGGGGAATGCATTATCTGGACCAATCCCATCTGAGATTTCAAACTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGAGCTCTCAGGTGAAATACCTGTGGACTTTGGGAAGCTAGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTCAAATACCATGGCAGTTAAGTAACTGCACAAGCCTTGCCACAGTTCAGCTCGATAAGAATCAGTTATCAGGTAAAATTCCATGGCAAGTTGGCAAGTTGAAGTTTCTGCAGAGTTTTTTCATGTGGGGTAATTCAGTGTCTGGAACCATACCATCCTCTTTTGGTAACTGCACTGAACTCTATGCACTTGACCTCTCAAGGAACAACCTCACAGGTTCTATTCCTGATGAGATTTTCAGTTTGAAGAAGCTGAGTAAGCTTCTTCTTCTTGGAAACTCATTAACTGGAAGGCTTCCACCAACTGTTGCAAATTGTGAATCTCTAGTGAGGCTGAGGGTTGGAGAAAACCAGCTTTCAGGACAGATTCCTAAAGAGATAGGCCAACTTCAGAATCTGGTGTTTCTTGACTTGTACATGAACAACTTCTCTGGAAGCTTACCAGTGGAGATTGCTAACATCACAGTTCTTGAGCTTTTGGATGTGCATAAGAACTACCTAACTGAGGAGATTCCATCTACGATCGGTGAACTTGAAAATTTGGAGCAGCTTGATCTCAGTAGAAACACTTTAACAGGTGAAATTCCTTGGAGCTTTGGAAACTTGAGTTATTTGAACAAGCTCATCCTCAACAATAATTCACTAACAGGATCAATTCCAAAATCCATTAGAAACTTGCAGAAGCTGACTCTATTGGATTTGAGTTGCAACAACCTTTCTGGTGGCATACCTCCTGAGATTGGTTATATTACAAGCTTAACCATCAGTTTGGACTTAAGCTCAAATGCATTCACAGGAGAAATCCCAGACTCAATGTCTGTTTTGACACAGTTGCAATCACTTGATCTTTCTAATAATATGCTTCATGGAACAATCAAGCTTCTTGGTTCTCTCACTAGTCTCACTTACCTCAACGTCTCCTACAACAACTTTTCAGGCCCTATCCCGGTAACTCCATTCTTCAGAACTTTATCTTCTAATTCATATCTTCAGAACTACCATCTATGCCAGTCCGTTGATGGAACTACATGTTCTTCAAATTTTATTCGGAAAAATTGTTTGCAATATGCAAAAACCATAGTTCTGATATTGGTGATTCTAGCTTCGGTTACCATAATTGTCATTGCATCATGGATTATAGTAACTCGGAGTCATAGATACAAGGTTGAAAAAAATTTGGGGATATCAGGTTCCACATCAGAGGATTTCTCTTATCCTTGGACCTTCATCCCATTTCAAAAGCTAAACTTCAGCATAGATAACATCTTGGATTGCTTGAAGGATGAGAATGTGATCGGAAAGGGTTGTTCTGGCATTGTCTATAAGGCTGAGATGCCTAATGGAGAGTTGATAGCAGTGAAAAAGCTTTGGAAAGCAAACAAAGAAGATGAAACTGTGGATTCTTTTGCTGCAGAAATTCAGATTCTCGGTTATATCCGGCATCGAAACATTGTGAAGCTCCTAGGATATTGTTCTAATAGAAGTGTTAAGCTTCTTCTCTATAACTTCATCCCAAATGGTAATCTAAGACAGCTTTTAGAAGGGAACAGGAACTTAGACTGGGAAATTAGATACAAGATTGCTGTTGGAACAGCTCAAGGTCTAGCTTACCTTCACCATGATTGTGTACCTACAATTCTCCACAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAGTTTGAGGCATATCTGGCAGATTTTGGTCTTGCAAAGCAAATGATTTCACCAACTTATCATCATGCAATGTCCAGAGTTGCTGGTTCCTATGGTTATATTGCCCCAGAGTATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTGTACAGTTATGGAGTAGTATTGCTAGAGATACTAAGCGGGCGTAGTGCTGTTGAATCTAATGTCGGAGATGGGCAACACATAGTTGAATGGGTTAAGAGGAAGATGGGAAGTTTTGAACCAGCAGTGTCAATACTAGATACAAAGCTCCAAAGTCTATCAAATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAACTCTTCCCCGGCGGAGCGACCCACCATGAAGGAAGTGATTGCACTGCTGATGGAGGTGAAGAGTCAGCCTGAAGAAATGAACAAAACTTCTCAACCTCTAATAAAACAATCCTCAAATCAAAGATGA 3213 0.4009 MENTVPHSVTILLLFLFCLTMTKIEVTSLSHDGEALLSLKSSPSVLSSWNPSSSTPCSWNGITCSPQGRVISVSIPDTFLNISYLPPQLSSLSMLQLLNLSSTNVSGSIPPSFGQLSHLQLLDLSSNSLTGSIPDELGRLSSLQFLFLNSNRLTGTIPQHLANLTSLQVLCLQDNLLNSSIPSQLGSLISLQQFRIGGNPYLTGQIPSQLGLLSNLTTFGAAATGLSGSIPSTFGNLINLQTLALYDTEISGSIPYELGLCSELRNLYLHMNKLTGSIPPHLSKLQKLTSMLLWGNALSGPIPSEISNCSSLVIFDVSSNELSGEIPVDFGKLVVLEQLHLSDNSLTGQIPWQLSNCTSLATVQLDKNQLSGKIPWQVGKLKFLQSFFMWGNSVSGTIPSSFGNCTELYALDLSRNNLTGSIPDEIFSLKKLSKLLLLGNSLTGRLPPTVANCESLVRLRVGENQLSGQIPKEIGQLQNLVFLDLYMNNFSGSLPVEIANITVLELLDVHKNYLTEEIPSTIGELENLEQLDLSRNTLTGEIPWSFGNLSYLNKLILNNNSLTGSIPKSIRNLQKLTLLDLSCNNLSGGIPPEIGYITSLTISLDLSSNAFTGEIPDSMSVLTQLQSLDLSNNMLHGTIKLLGSLTSLTYLNVSYNNFSGPIPVTPFFRTLSSNSYLQNYHLCQSVDGTTCSSNFIRKNCLQYAKTIVLILVILASVTIIVIASWIIVTRSHRYKVEKNLGISGSTSEDFSYPWTFIPFQKLNFSIDNILDCLKDENVIGKGCSGIVYKAEMPNGELIAVKKLWKANKEDETVDSFAAEIQILGYIRHRNIVKLLGYCSNRSVKLLLYNFIPNGNLRQLLEGNRNLDWEIRYKIAVGTAQGLAYLHHDCVPTILHRDVKCNNILLDSKFEAYLADFGLAKQMISPTYHHAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESNVGDGQHIVEWVKRKMGSFEPAVSILDTKLQSLSNQMVQEMLQTLGIAMFCVNSSPAERPTMKEVIALLMEVKSQPEEMNKTSQPLIKQSSNQR* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0102 1070 PANTHER UNNAMED PRODUCT 1 1066 - -
Lan20g0102 1070 Pfam Leucine Rich repeats (2 copies) 623 660 IPR025875 -
Lan20g0102 1070 PANTHER - 1 1066 - -
Lan20g0102 1070 Pfam Leucine Rich Repeat 527 549 IPR001611 GO:0005515
Lan20g0102 1070 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Lan20g0102 1070 Gene3D Ribonuclease Inhibitor 182 276 IPR032675 -
Lan20g0102 1070 Gene3D Ribonuclease Inhibitor 472 565 IPR032675 -
Lan20g0102 1070 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
Lan20g0102 1070 Gene3D Ribonuclease Inhibitor 277 375 IPR032675 -
Lan20g0102 1070 Gene3D Ribonuclease Inhibitor 566 693 IPR032675 -
Lan20g0102 1070 SUPERFAMILY Protein kinase-like (PK-like) 752 1045 IPR011009 -
Lan20g0102 1070 ProSiteProfiles Protein kinase domain profile. 773 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0102 1070 SMART serkin_6 773 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0102 1070 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Lan20g0102 1070 Gene3D Phosphorylase Kinase; domain 1 748 850 - -
Lan20g0102 1070 Gene3D Transferase(Phosphotransferase) domain 1 851 1068 - -
Lan20g0102 1070 PRINTS Leucine-rich repeat signature 119 132 - -
Lan20g0102 1070 PRINTS Leucine-rich repeat signature 622 635 - -
Lan20g0102 1070 Pfam Protein kinase domain 775 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0102 1070 ProSitePatterns Protein kinases ATP-binding region signature. 779 802 IPR017441 GO:0005524
Lan20g0102 1070 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Lan20g0102 1070 SUPERFAMILY L domain-like 44 393 - -
Lan20g0102 1070 SUPERFAMILY L domain-like 368 687 - -
Lan20g0102 1070 SMART LRR_typ_2 405 429 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 333 357 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 164 188 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 285 309 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 622 645 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 525 548 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 573 597 IPR003591 -
Lan20g0102 1070 SMART LRR_typ_2 116 140 IPR003591 -
Lan20g0102 1070 Gene3D Ribonuclease Inhibitor 376 471 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0102 Lan-Chr20 607242 611465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0102 24 1064 Receptor kinase-like Gene Family AT5G56040 45.076 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan20g0102 Pkinase 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0102 - - ccaj:109812175 1809.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0752 8 9713205 9717170 Lan20g0102 20 607242 611465 LSH