Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0094 ATGGGTTGTGTTCAGGCTAAGCCTTGTGAAGAATCAGATTACTCATTGGTTCTACACAAGTTGAAATTGGAAAATGGGTATTATTCTAATCATGACTTTGTTCCTCATAGAAGATCCACTGGTCAAACTCTTCATCATCATGTACAAGTAGAACCACCCAGAAACCATAATAAACTTGACTCTTCTGTTTCCAATGATGCAAAGAAGAGAGATGTTGATGTTGATGTTGATGTTGATGTTGTTGATGGTAATAACAAGTTTTTAATGAAGGCTTCTGTTGAGAATGAGAATGAGAATGAAATGGTTGATGGGTGGCCAAGATGGTTACTTGATAATGTTCCTATACAAGTCTTAGCTGGCTTGGTTCCCAAGAGTGCTGAATCTTTCAAAATGATTGATAAGGTAGGACAAGGAACATACAGCAACGTGTATAAAGCTCTAGATCGAGACACTGGAGAAATTGTGGCCCTCAAGAAGGTCAAGTTCAATACATCAAAGCCTGGAAGTATTAAATTTATGGCAAGAGAAATTATGACACTACAGAGATTAGATCATCCCAATGTAGTAAAACTGAAAGGATTAGCCACTTCAAGAATGAAGTATAGCATATATTTAGTTTTTGATTTCATGCAAACAGATTTGGCAAGAATTATTGCTCGTCCTGGGGAGAGGCTAACCGAACCACAGGTCAAGTGCTATATGCGTCAATTGCTTTCGGGTCTACAGCATTGCCATGATAGGGGAATTTTGCATCGAGATATCAAGGGATCAAACCTTTTGATTGATAAGAATGGGATGCTTAAGATTGCAGATTTTGGACTTGCCAATTATTACAATCCAAACCAGAACCGGCCTCTCACAAGCAGGGTTGTGACACTATGGTATAGAGCTCCTGAGTTGTTGTTAGGGGCCACAGACTATGGAGTTGGTATTGATTTATGGAGTGCTGGGTGCCTCTTAGCAGAAATGTTTACAGGATTTCCAATCATGCCTGCTAGAACCGAGGTTGAGCAACTTCATAAAATTTTCAGGCTATGTGGTACACCATCAGAGGAGTATTGGAAAAAATTGAATCTTTCTACAACTTTTAGACCTCCAAAATCTTATAGACCTAGCATTGTAGAAACTTTCAGGGATCTCCCTTCATCTTCTTTGGGTCTTTTATGTACTCTGCTTGCTTTGGATCCTGCATTCCGTGGCAGTGCGTCTAAAGCTCTTAAAAATCAGTTTTTCTTTACCAGCCCATTGGCATGTGACCTCTCTGGTCTGCCTGTAGTCTACAGTGAAGATGATGAGCTCTATCAAGTCAAAGAACAGATCAAGTACATGAACTCTAAAATCAGGCGGAGTCACACATTTCTTGATCATCATAAGAATTTAGCATCTAAGAGGCAAATAGAACATTCTGTTTCTTGTAAATAG 1422 0.3924 MGCVQAKPCEESDYSLVLHKLKLENGYYSNHDFVPHRRSTGQTLHHHVQVEPPRNHNKLDSSVSNDAKKRDVDVDVDVDVVDGNNKFLMKASVENENENEMVDGWPRWLLDNVPIQVLAGLVPKSAESFKMIDKVGQGTYSNVYKALDRDTGEIVALKKVKFNTSKPGSIKFMAREIMTLQRLDHPNVVKLKGLATSRMKYSIYLVFDFMQTDLARIIARPGERLTEPQVKCYMRQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANYYNPNQNRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFTGFPIMPARTEVEQLHKIFRLCGTPSEEYWKKLNLSTTFRPPKSYRPSIVETFRDLPSSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPVVYSEDDELYQVKEQIKYMNSKIRRSHTFLDHHKNLASKRQIEHSVSCK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0094 473 PANTHER CYCLIN-DEPENDENT KINASE 1 471 - -
Lan20g0094 473 ProSiteProfiles Protein kinase domain profile. 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0094 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lan20g0094 473 Gene3D Phosphorylase Kinase; domain 1 119 211 - -
Lan20g0094 473 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Lan20g0094 473 MobiDBLite consensus disorder prediction 39 66 - -
Lan20g0094 473 PANTHER CELL DIVISION PROTEIN KINASE 1 471 - -
Lan20g0094 473 SUPERFAMILY Protein kinase-like (PK-like) 124 415 IPR011009 -
Lan20g0094 473 Gene3D Transferase(Phosphotransferase) domain 1 212 447 - -
Lan20g0094 473 SMART serkin_6 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0094 473 Pfam Protein kinase domain 130 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0094 Lan-Chr20 545712 549781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0094 124 458 Core Cell Cycle Gene Families AT5G10270 44.101 3.21e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan20g0094 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0094 K08819 - gmx:100776854 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0094 20 545712 549781 Lan20g0094 20 545712 549781 ECH