Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0074 ATGAAGAGTGTTGTTGTTGTTGTTGATGTTGTATTATTGTATCTGGTGATGGTGGTGCCATGGCGCGTTTGGTGCCAACAACAGGGGCTACATGTGAACATGACGCATGTTCAGAATGCTCGTGCTACCAATGCTCTTTGTTTGGATGGGAGTTTACCCGCGTATCATTTACACAGAGGATATGGAGCTGGAATCAATAATTGGCTTCTACAATTCGAGGGAGGTGGGTGGTGCAATGACTTGGCTTCATGCTTGGTTAGAGCCCAAACTCGAAGGGGCTCAACACGTTTCATGAACAAGTGGGAGACCTTTTCTGGCATTTTGAGCAATGATTCTTCCCTTAATCCAGACTTTTACAACTGGAACCGTGTGAAGCTTAGATATTGTGATGGAGCTTCATTCACTGGTGACACTGTGTTCAATAATAAGACAACAATGCTTTATTTCAAAGGGCAGAAGATTTGGGAAGCTATCATCCGAGACCTTCTGCCAAAAGGTTTGGGAAAGGCACGCAAGGCTTTGCTTTCAGGTTGTTCTGCTGGAGGTTTAGCAACCTTTCACCATTGTGACAACTTCGCCAAGTATTTGCCAAGTAATGCAAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTTCTTGACGGGAGAGATATAAGTTTGAACCACACTATGCGCTATTTCGTCAAAAGCCTTGTTGAATTGCAGGGGGTAGAGCAGAACCTAAATAGAAATTGCACAAGTACACTGTTCTTTCCAGATCTGTGCTTCTTTCCACAATATGCCTTGAGATACATATCAACACCATATTTCATCTTGAATTCTGCCTATGATGTATTCCAATTCCGTCATATATTGGTGCCACCTTCTGCTGATATGCATGGACATTGGAACCACTGCAAGTTGGACCCAGCGGCATGCACACCAGACCAAATTAATATATTGCAAGGTTTTAGGCACTACATGCTTGCAACTTTGCGACCATTCTACATATATTCAGGAAGAGGGGGAATGTTCATAAATTCATGCTTTGCTCATTGCCAAAGTGAATCAAATGATACTTGGTTTGCAGATGATTCTCCAAGAGTAAACAACAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACAGAAGCAAGGAAATAGACTGTGCATATCCATGTGATACAACCTGCATTAATAATATACCACAATCTCAGGTCACATAG 1212 0.42 MKSVVVVVDVVLLYLVMVVPWRVWCQQQGLHVNMTHVQNARATNALCLDGSLPAYHLHRGYGAGINNWLLQFEGGGWCNDLASCLVRAQTRRGSTRFMNKWETFSGILSNDSSLNPDFYNWNRVKLRYCDGASFTGDTVFNNKTTMLYFKGQKIWEAIIRDLLPKGLGKARKALLSGCSAGGLATFHHCDNFAKYLPSNASVKCLSDAGFFLDGRDISLNHTMRYFVKSLVELQGVEQNLNRNCTSTLFFPDLCFFPQYALRYISTPYFILNSAYDVFQFRHILVPPSADMHGHWNHCKLDPAACTPDQINILQGFRHYMLATLRPFYIYSGRGGMFINSCFAHCQSESNDTWFADDSPRVNNKTIAEAVGDWYFSRNRSKEIDCAYPCDTTCINNIPQSQVT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0074 403 PANTHER PECTIN ACETYLESTERASE 9 25 398 - -
Lan20g0074 403 Pfam Pectinacetylesterase 25 378 IPR004963 GO:0016787
Lan20g0074 403 PANTHER NOTUM-RELATED 25 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0074 Lan-Chr20 388164 395348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0074 1 400 Carbohydrate Esterase AT5G23870 63.793 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0074 K19882 - gmx:100802358 670.233