Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0072 ATGGCTCCAAAACAGCCAAGTACGGGTCTTTTTGTTGGACTGAACAAAGGTCATGTTGTTACCAAAAGGGAATTACCTCCACGCCCTTCAGATCGCAAAGGGAAAACAAGCAAGAGGGTGCACTTCGTCAAGAACCTTATTCGCGAAGTTGCTGGTTTTGCACCTTATGAAAAGCGTATCACTGAGTTGCTGAAGGTTGGAAAGGATAAGAGGGCTCTGAAAGTGGCAAAGAGAAAGCTTGGAACCCACAAGCGTGCAAAGAGAAAGCGTGAGGAGATGTCCAGTGTTCTTCGCAAGATTAGGGCTGGTGGTGGAGCCGGTGACAAGAAGAAGTAA 336 0.4732 MAPKQPSTGLFVGLNKGHVVTKRELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKIRAGGGAGDKKK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0072 111 MobiDBLite consensus disorder prediction 87 111 - -
Lan20g0072 111 Gene3D 60S ribosomal protein L36 1 104 IPR038097 -
Lan20g0072 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Lan20g0072 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lan20g0072 111 MobiDBLite consensus disorder prediction 1 37 - -
Lan20g0072 111 MobiDBLite consensus disorder prediction 79 111 - -
Lan20g0072 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lan20g0072 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0072 Lan-Chr20 377734 379523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0072 7 111 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 85.849 4.76e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0072 K02920 - gmx:100796037 207.608