Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0069 ATGCCTTCATGGTGGGGAAAATCGTCATCAAATTCAAAAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATGGACACATTGCACCGGAAATTTAAAATTCCATCTGAAGTTAAACTAAATGGTAAAACTGGAGGATCTTGTACTCGTAGACATTTCAATGACACAATTTCAGAGAAGGCAGACAATTCTCCTGCTGTCTCAAGATCTCCTTCGCCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGTTTGCACCCTTCAAGTTTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACCAGAGAAGGGCTCAAAGCCATCATTGTTTCTTCCGCTTCCAAAACCTGCATGCATGCATGGTAGGCCGAACCCTTCCGATTTTGATGGAGATCTGATCACTGCTTCACTCTCTAGTGATTGCTCTGTTGATAGTGATGAGCCAGTTGAGTCACACAACCGTAGTCCTCAGGCAACTGACTCTGAGACTTTGATTAGAACTGCTGCTGGCAGTCCTTCCAGCTTGATGCACAAGCATCAGTCAACTGCTGTTTCCCAGCCAAATTCAAAAGAAGCCAAAAAACCAGCAAACATTCTGAATAATCATATATCTTCTACTTCACCAAAGCGGAGGCCTTCACGCAACCATGTTCCAAATCTGCAAATTCCCCCTCATGGTGCTTTCTACAGTGCTCCTGACAGTTCCTTGTCAAGTCCATCTAGAAGTCCATTGAGAACATTTAGCAATGATCAGGTTTTGAACTCTGTTTTTTATTATTCTGGAAAGCCATATTCTGAGGTCAATTTCATTGGATCTGGGCACTGCTCTAGTACAGGCTCTGGTCAGAATTCAGGGCATAATTCAATGGGAGGGGATATGTCAGGACAGTTATTCTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCGATACCTAGTCCTAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTCACACCTATTCATCCTAGAGCCGGGGGAGCACCAAATGAATCACAGACAGGATGGGCTGATGAAGGGAAACAACGGAGTCATCGTTTGCCCCTTCCTCCCTTGGTTGTTACTAATTCCTCACCTTTCTCTCATTCAAATTCTGCTGCAACATCTCCATCTGTGCCAAGAAGTCCAGCTAGAGCAGATAATCCAATGAGTCCTGGCTCACGTTGGAAAAAGGGAAAGCTACTTGGTAGAGGCACATTTGGACATGTCTACCTTGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATGCCAAGTCTAAGGAATGTGCTAAGCAATTAAATCAGGAAATTAATCTATTAAGCCGTTTACGACATCCGAATATTGTGCAGTACTATGGTTCTGAAACAGTAGATGACAGGCTTTACATATACCTGGAGTATGTATCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGAGGAATTTAGTGAACCAGTTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTGTTCACAGGGACATCAAGGGAGCAAATATACTGGTAGATCCAAATGGCCGGGTCAAGTTGGCAGATTTTGGAATGGCAAAACATATAACAGGGCAGACATGTCCATTATCATTCAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTTATAAAGAACAATGGGTTGAACCTTGCTGTGGATGTATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATAGTCTCTCAATTGAAGGAAAAGACTTTGTTAGGAAATGTCTACAACGTAATCCGCGGGATCGCCCTTCGGCCAGTGAATTATTGGATCACCCTTTTGTAAAGTGTACTTCACCTTCAGAAAGATCTAGTCTGTGTCCTGAGGCTTCAGACCCTGTTTCTTGGATTACACATGGAACAAAAGCTCTGGGCATTGGACAAGGGAGAAACCTTCCTATCTTGGATTCAGATAGACTCGCTGTTCATTCTTCCAGGGTTTTGAAAACTAGTCCTCATGCAAGTGAAATCCATATTCCAAGGAATATATCTTGTCCGGTCTCTCCTATTGGAAGCCCACTTTTGAAGTCAAGATCACCACAACACGTGAATGGGAGAATGTCTCCTTCTCCAATATCAAGCCCTCGGACCACTTCTGGTGCATCCACACCTCTCACTGGTGGCAGTGGCGCCATTCCATTTAGTAATCACTTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAGCATGCCAAAGTTGTCCTCAAATAGTGTCTACATGAATATGAATGGCCCTATTCATCATGAGTCAAATACTGACATGTTTAGAGGAATGCAAATTGGGTCTCACATGACATCAGAAATGGTTCCCAATGAAAATGATGTTCTTGGTAAGCAGATCGGAAGGCCTCATCTTGCTGAGCCATATGATTTTCAGTCAGTCTTGGCTGATCATGTTGGACGGCAGCTGCTGGGGGATCATGTTAATCCATCCCTTGATCTAAGTACTAACTCATCGTTGCTCAATCGGGAAAACGGTTTATGA 2715 0.432 MPSWWGKSSSNSKETKKKANKESFMDTLHRKFKIPSEVKLNGKTGGSCTRRHFNDTISEKADNSPAVSRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSLGRVDSEISISSKSRPEKGSKPSLFLPLPKPACMHGRPNPSDFDGDLITASLSSDCSVDSDEPVESHNRSPQATDSETLIRTAAGSPSSLMHKHQSTAVSQPNSKEAKKPANILNNHISSTSPKRRPSRNHVPNLQIPPHGAFYSAPDSSLSSPSRSPLRTFSNDQVLNSVFYYSGKPYSEVNFIGSGHCSSTGSGQNSGHNSMGGDMSGQLFWQPSRGSPEYSPIPSPRMTSPGPSSRIQSGAVTPIHPRAGGAPNESQTGWADEGKQRSHRLPLPPLVVTNSSPFSHSNSAATSPSVPRSPARADNPMSPGSRWKKGKLLGRGTFGHVYLGFNNDSGEMCAMKEVTLFSDDAKSKECAKQLNQEINLLSRLRHPNIVQYYGSETVDDRLYIYLEYVSGGSIYKLLQEYEEFSEPVIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQTCPLSFKGSPYWMAPEVIKNNGLNLAVDVWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDSLSIEGKDFVRKCLQRNPRDRPSASELLDHPFVKCTSPSERSSLCPEASDPVSWITHGTKALGIGQGRNLPILDSDRLAVHSSRVLKTSPHASEIHIPRNISCPVSPIGSPLLKSRSPQHVNGRMSPSPISSPRTTSGASTPLTGGSGAIPFSNHLKQSVYFQEGLGSMPKLSSNSVYMNMNGPIHHESNTDMFRGMQIGSHMTSEMVPNENDVLGKQIGRPHLAEPYDFQSVLADHVGRQLLGDHVNPSLDLSTNSSLLNRENGL* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0069 904 MobiDBLite consensus disorder prediction 59 77 - -
Lan20g0069 904 SUPERFAMILY Protein kinase-like (PK-like) 404 672 IPR011009 -
Lan20g0069 904 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 815 - -
Lan20g0069 904 ProSiteProfiles Protein kinase domain profile. 416 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0069 904 MobiDBLite consensus disorder prediction 169 229 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 292 318 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 1 261 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 11 37 - -
Lan20g0069 904 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 815 - -
Lan20g0069 904 Gene3D Transferase(Phosphotransferase) domain 1 414 691 - -
Lan20g0069 904 SMART serkin_6 416 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0069 904 MobiDBLite consensus disorder prediction 246 261 - -
Lan20g0069 904 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Lan20g0069 904 MobiDBLite consensus disorder prediction 747 787 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 104 118 - -
Lan20g0069 904 Pfam Protein kinase domain 417 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0069 904 CDD STKc_MEKK1_plant 415 671 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 292 418 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 750 787 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 381 402 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 886 904 - -
Lan20g0069 904 MobiDBLite consensus disorder prediction 884 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0069 Lan-Chr20 352048 358416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0069 4 891 MAP Kinase Kinase Kinase AT1G63700 57.606 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan20g0069 Pkinase 1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0069 K20717 - gmx:100792783 1372.07