Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0063 ATGGATATCCTAAACCTTATACCTTTTATCTTTCTCTTTTTCATTCCATACTCTTTTTGTTTCACTCCCTTAGATAACTATCTCATCAACTCTGGATCATACTCCAATGCTTCACTCTTCAACCGAGTCTTCATACCTGATTCCACTTTTCTCTATGCTCATGATTCCATTTCACTCACTAACCAAAACCCACCTCCAAATTCTCCTACTTTGTACCACACAGCCAGAGTTTTCACCAACTCTGCTAGTTACACGTTCAACATGAAGAAAAATGGTATCCATTTTCTGCGTTTTCATTTCTTTCCCTTTAAAGCTCAAGGTTTTTATATGAATTCTGCAAAGTTTGATGTATTGGTTAATGGTATTTTGGTTCTGAGTGATCTCAAGTTAACTAATGATGTGTTGGTTAAAGAGTTTATTCTGAAGATACAATCAAACTTGCTTGAAATTTTATTTAGACCTGTTGGTAACTCGGGTTTTGGATTTGTAAATGCTTTGGAGGTGTTTACTGCTCCTCCAGATTTTGTATCAGATTATGGAACCAGGTTGGTTGGTTCTAATGGACTAGAGAAGTACAAGAACCTTTCGACTCGGGTTTTAGAAACTATTCATAGAATTAATGTTGGAGGTTTAAAAATAACTCCTTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTTTCTGGTTTTTAAAATTGCTGCTAAGGCTGCAGTAAGCACTCACATACCAAATTACCAGAAAGGAGGAGGCGCCACACCAGAGATCGCGCCGGATAATGTTTACATGACTGCTCAGCAGATGAATAGAGAAAACTCAATTTTAGCTTCAAGGTTCAACATAACCTGGAATTTTTCTGTGGCTCCTCCTGGTGCTGGTGGTGTTCCACACTTGGTTCGGTTGCATTTCTGTGACATTGTTAGTCCTGTTCTTAACGTGCTCTACTTTGATGTGTATATTAATGAGTATATTGCATATAAGGATCTTGATTTGTCATCCATTACAGTCCACACACTTGCATCGCCGGTCTATGTGGATTTTGTTGCAGATTCAGATGATTCAGGTGTTATTCAAATAAGTGTTGGTCCTTCTGACCTAAGCAGCGCCATGAGGATGAATGCCATATTGAATGGTGCAGAGATAATGAAGGTGGTGAATGTTATTGATTCTGATATTGTTCACAGGAAGAAAAAATTAGGCATGTTGGTGAGTTCAGTTATTGGAGGTGTTGTTGGCTTGTTTACAATTATCACCGCTCTTCTACTTGCTATGAGATGCAGGAAGAAGAATCGGAAACTAAGGACAGTGGAAAGTGCTGGGTGGACGCCTTTGCGTATGTTTGGAGGGAGTTCCCTTCATAGAATGCTGTCTGAACCCGGTTCTCATGGATATTCAGGCTTGAAGATCCCTTTTGCTGATATACAATCAGCAACAAACAATTTCGATAGAAGCCTGATTATAGGGTCCGGTGGGTTTGGTATGGTTTACAAAGGGGTGCTTAAAGACAATGTGAAGGTTGCAGTGAAGAGAGGTATGCCAGGGTCCAGACAAGGACTTCCAGAATTCCATACCGAAATAACAGTGCTATCCAAAATTCGCCATCGCCATCTTGTTTCACTAGTTGGATTCTGCGAAGAAAATTCAGAGATGATACTTGTGTATGAGTATGTGGAAAAAGGTCCACTTAAAAGGCACTTATATGGTTCAGCAGCAATACCACCTCTCTCTTGGAAGCAGCGTCTTGAAATATGCATCGGTGCAGCTAGAGGTCTTCACTATCTTCACACCGGTTTCGTACAAGGAATCATCCACCGTGACATTAAATCAACCAATATATTGCTTGATGAAGATTATGTGGCCAAGGTTGCCGACTTTGGTCTTTCAAGATCAGGGCCATGTATGAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGCTTTGGTTATCTTGATCCCGAGTATTACCGGAGGCAGCAGCTTACAGATAAATCAGATGTTTATTCATTTGGTGTTGTGCTTTTCGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAACTAACAAGGGAGCAAGTGAACTTAGCAGAATGGGCACTTGAATGGCTGAACAAGGGCATGCTGGAGCATATTGTTGATCCTCATCTTGTTGGACAGATCAAAGAAAGTTCATTGAAGAAGTTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGATAGGCCAACTATGGGTGATGTGTTATGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGGACAACAAAGGGAGCCAAATATTGATAGCAGTACTAATGAAGCAGTGAATGTGACAACTAGAATTGTTCTTGGAAGTTCTTCTAGCAACAGAACAGAGAGAGATTATGATAACGGTTGTTCAGACATAGGTACTAGCCAAGTGTTTTCCCAACTAATGACCAATGAAGGAAGATAG 2466 0.4039 MDILNLIPFIFLFFIPYSFCFTPLDNYLINSGSYSNASLFNRVFIPDSTFLYAHDSISLTNQNPPPNSPTLYHTARVFTNSASYTFNMKKNGIHFLRFHFFPFKAQGFYMNSAKFDVLVNGILVLSDLKLTNDVLVKEFILKIQSNLLEILFRPVGNSGFGFVNALEVFTAPPDFVSDYGTRLVGSNGLEKYKNLSTRVLETIHRINVGGLKITPFNDTLWRTWIPDEDFLVFKIAAKAAVSTHIPNYQKGGGATPEIAPDNVYMTAQQMNRENSILASRFNITWNFSVAPPGAGGVPHLVRLHFCDIVSPVLNVLYFDVYINEYIAYKDLDLSSITVHTLASPVYVDFVADSDDSGVIQISVGPSDLSSAMRMNAILNGAEIMKVVNVIDSDIVHRKKKLGMLVSSVIGGVVGLFTIITALLLAMRCRKKNRKLRTVESAGWTPLRMFGGSSLHRMLSEPGSHGYSGLKIPFADIQSATNNFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFHTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSAAIPPLSWKQRLEICIGAARGLHYLHTGFVQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCMNETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWALEWLNKGMLEHIVDPHLVGQIKESSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESGQQREPNIDSSTNEAVNVTTRIVLGSSSSNRTERDYDNGCSDIGTSQVFSQLMTNEGR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0063 821 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0063 821 Pfam Malectin-like domain 39 386 IPR024788 -
Lan20g0063 821 Gene3D Transferase(Phosphotransferase) domain 1 559 781 - -
Lan20g0063 821 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 766 - -
Lan20g0063 821 PANTHER OS07G0166700 PROTEIN 15 766 IPR045272 GO:0004714|GO:0006468
Lan20g0063 821 SUPERFAMILY Protein kinase-like (PK-like) 469 752 IPR011009 -
Lan20g0063 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Lan20g0063 821 Gene3D - 199 388 - -
Lan20g0063 821 Gene3D - 26 172 - -
Lan20g0063 821 CDD STKc_IRAK 489 755 - -
Lan20g0063 821 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0063 821 Gene3D Phosphorylase Kinase; domain 1 455 558 - -
Lan20g0063 821 Pfam Protein tyrosine and serine/threonine kinase 488 700 IPR001245 GO:0004672|GO:0006468
Lan20g0063 821 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0063 Lan-Chr20 327530 330303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0063 1 821 Receptor kinase-like Gene Family AT3G46290 47.939 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan20g0063 Malectin_like 2.1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0063 - - gmx:100801169 1272.69