Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0059 ATGGCAGAGCCGCCACCACAACAACCGCATAAAACATACAAACTAACAGCTACTTCAATCTCCTACACAAAATCAACTTCCACTAACACTTCCCTTATTAATAATATTGCACCACTCTTTCTCTTCAAACATTGCACAACAACTCCACCTTCCTACATTCTCAAAGATGTTTCCCTCACTGCTTACCCTTCTCAAATCCTTGCCATTGTTGGTCCTAGTGGTGCTGGAAAATCTACCCTTCTAGATATTCTATCTGCTAGGACATTACCCTCAACTGGGACTCTTTCCCTTAACTCTTCCCCTTTGAACCCCTCCACCTTCAGAAAACTCTCAGCATATGTCCCTCAACACGATGCATGCCTCCCTTTGCTCACTGTTTCTGAGACTTTTACTTTTTCTGCATGCCTTCTCAAGCCTTATAAGACATGTGATATTTCTATCATTGTTTCCTCTCTTCTCAGTGAACTTAGACTAACCCATTTGGCTAACACAAGACTCGGTCATGGCTTATCAGGTGGAGAACGAAGAAGGGTCTCTATAGGACTTAGTCTCCTTCATGATCCAGCAGTGTTGCTCCTTGATGAACCAACTTCTGGACTTGACAGCACCTCTGCGTTCAAAGTCATGCAGATTCTGAAGTCAACTTGTGTTTCTCGTCACAGGACAATTATTCTTTCCATTCACCAACCAAGCTTCAAGATCCTCTCTTGCATTGACAGGATCTTGCTGTTATCAAAAGGGACAGTGGTTCATCATGGAAGCCTTGCTTCACTTCAATCATTCTTGCACTCAAATGGCTTCATTGTACCTCATCAACTCAATGCCTTGGAATATGCCATGGAAATATTAAACCAACTAAATGAGCTTAAACCAATTACTCCACCAAGCATTCCTGATTCTCCAGAAAGTTCTACAACTTCTCTATCTGATCATAATAGTGGAACTAAGACTATTATTACTACTAATACTATGAGAGAGATCCGGTACAAGAGTTCTAGGATCCATGAAATATGCACTCTTTATAGCAGGTTTTGGAAGATCATTTTCAGAACTAGGCAACTCCTTTTGACTAACACATTAGAGGCACTTCTAGTGGGTCTTGTTTTAGGAACAATTTACATCAACATAGGTTATGATAAGGAAGGCATTGAGAAAAGGTTTGGTCTCTTTGCATTCACTCTCACATTCCTCCTATCTTCCACAACTGAAACACTTCCAATCTTCATTAATGAAAGGCCAATCTTGTTAAGAGAAACTTCAAGTGGGGTTTATAGGTTATCATCTCATCTCATTGCAAACACACTTGTTTTCTTGCCATATTTATTAGTAGTTGCTGTTATATACTCTATACCAGTCTACTTCTTAGTTGGTCTATGTGCTTCTTGGTTATCTTTTTCTTATTTTGTTTTGGTCATATGGGTCATAGTTCTTATGGCAAACTCTTTTGTCCTATTTTTGAGTTCTCTTGCTCCAAACTACATTGCTGGAACTTCACTCTTGACTATGCTTCTTGCAGCATTTTTTCTCTTCTCTGGCTATTTTATCTCAAAGGATAGCTTACCAAAATACTGGCTCTTCATGCATTTCTTGTCTATGTATAAATATGCTCTTGATGCTCTTCTTATCAATGAGTATTCTTGCTTAGTTACAAGGTGTTTCATGTGGTACCAAGAAAATAACCAGCTTTGCATGGTTACGGGTGCTGAGGTGTTACAAAATAGAGGGCTAAGCGTGGGAGATAGATGGAGCAACGTGTATTTCTTGATTGGCTTCTTTGTGTTATATCGTGTGCTTTGCTTCTTGGTTTTGCTTAGAAGGGTTTCAAGATCCAAAAGATGA 1839 0.3948 MAEPPPQQPHKTYKLTATSISYTKSTSTNTSLINNIAPLFLFKHCTTTPPSYILKDVSLTAYPSQILAIVGPSGAGKSTLLDILSARTLPSTGTLSLNSSPLNPSTFRKLSAYVPQHDACLPLLTVSETFTFSACLLKPYKTCDISIIVSSLLSELRLTHLANTRLGHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRHRTIILSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQSFLHSNGFIVPHQLNALEYAMEILNQLNELKPITPPSIPDSPESSTTSLSDHNSGTKTIITTNTMREIRYKSSRIHEICTLYSRFWKIIFRTRQLLLTNTLEALLVGLVLGTIYINIGYDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSHLIANTLVFLPYLLVVAVIYSIPVYFLVGLCASWLSFSYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTMLLAAFFLFSGYFISKDSLPKYWLFMHFLSMYKYALDALLINEYSCLVTRCFMWYQENNQLCMVTGAEVLQNRGLSVGDRWSNVYFLIGFFVLYRVLCFLVLLRRVSRSKR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0059 612 Pfam ABC transporter 54 198 IPR003439 GO:0005524
Lan20g0059 612 Pfam ABC-2 type transporter 228 288 IPR043926 GO:0140359
Lan20g0059 612 MobiDBLite consensus disorder prediction 299 315 - -
Lan20g0059 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 4 606 - -
Lan20g0059 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 606 - -
Lan20g0059 612 Pfam ABC-2 type transporter 336 545 IPR013525 GO:0016020|GO:0140359
Lan20g0059 612 Gene3D - 34 269 IPR027417 -
Lan20g0059 612 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
Lan20g0059 612 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 271 IPR003439 GO:0005524
Lan20g0059 612 SMART AAA_5 63 248 IPR003593 -
Lan20g0059 612 MobiDBLite consensus disorder prediction 294 315 - -
Lan20g0059 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 262 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0059 Lan-Chr20 305667 307887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0059 47 280 Calmodulin-binding Proteins AT2G36910 26.446 5.02e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0059 K05681 - gmx:100790712 879.011