Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0041 ATGGATTACACACTCAGTTCTGACGGGACTACAATGATTCAGTCGCCGGAGCCGGCGGTTTCCCTGAAAGAAGAGCGCACAGACACGGACCAAAGTCTGGGAGACTCTATTCCAGTGACGTTAGCAATGTCAACGCCGGCAAGGAAACCGTCGAAGGACAGGCACACGAAGGTGGAGGGTCGTGGCCGGAGAATTCGAATGCCGGCGACATGCGCTGCAAGAATATTCCAGCTCACCCGTGAGCTCGGGCACAAATCAGACGGAGAAACAATCCGATGGTTGCTAGAGCATGCTGAACCGGCGATCGTAGAAGCCACCGGCAGCGGGACCATCCCTGCTATCGCTGTCTCTGTTGGTGGGAGCTTAAAGATTCCAACTTCATCAGATGGTGAAGAGAGTGGAAGAAAGAGAAGAAGAGCATCAAACAGTGAATTCATTGAAGTGAATGAGCGTGGTTCAATATCTTCAGGGCTTGCACCAATTGCACAAACTTGTTATGGAATCCCACAAAGTGGACTAGTTCCACTGTGGCCGGTGAGTATGCCTCAATATTGGGTCATACATGCAAGTGCTACCCCATTTTTCAATTTGCAGATGCAACACTTTTTAGGGTCTACATCTACTATGGTTCCTAGTTTCAGTTCTTGTACTAGTAGTGCTGCTATTAGTAATCCTCCTACTCAGAAAGAGCTCTCATTTATGCCTCCCTCTCACGCCAATTCAGAACCATCTTCTACTTCAAACCCTTGA 750 0.488 MDYTLSSDGTTMIQSPEPAVSLKEERTDTDQSLGDSIPVTLAMSTPARKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIVEATGSGTIPAIAVSVGGSLKIPTSSDGEESGRKRRRASNSEFIEVNERGSISSGLAPIAQTCYGIPQSGLVPLWPVSMPQYWVIHASATPFFNLQMQHFLGSTSTMVPSFSSCTSSAAISNPPTQKELSFMPPSHANSEPSSTSNP* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0041 249 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 23 246 - -
Lan20g0041 249 MobiDBLite consensus disorder prediction 123 142 - -
Lan20g0041 249 MobiDBLite consensus disorder prediction 217 249 - -
Lan20g0041 249 MobiDBLite consensus disorder prediction 1 36 - -
Lan20g0041 249 ProSiteProfiles TCP domain profile. 51 105 IPR017887 -
Lan20g0041 249 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 246 IPR005333 GO:0003700
Lan20g0041 249 MobiDBLite consensus disorder prediction 1 17 - -
Lan20g0041 249 Pfam TCP family transcription factor 51 128 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0041 Lan-Chr20 209079 210327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0041 46 197 TCP Transcription Factor Family AT5G51910 56.593 8.69e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan20g0041 TCP 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0041 - - cam:101514016 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0041 20 209079 210327 Lan4g1884 4 27158614 27163738 LSH