Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0039 ATGGGTAAGAACGTTTGGTATTGGAGTGGAAGCAGGTCCTCCAAGTCTAAGGGAGGTGGAACAGTTGAAACTCCAGAAATCCCTTCTGGTTGCATGTGTGCACTTTTTCAACCCTTTCATTTCCATCCATTTCACTTTAACATTAACAACCAACAACAACAACAGCAGCAGCAGCAGCAACCCCCTTTCAACTCTTCCTCTCATAATATCCCACAAGGCCTGCTAAGTGTCCCCAAAGGAGCTGAAGCACCTCGGAATAGCTTGGAATCAGAAGATGGCACGGCTTCATCCATCTCAAAAGATCAAAATTTAAAAATTCCCAAGAATATAAGAGTCAAAACAAGTGGAGCTAGCACAAGAGCAAGAGGAGGAAATTTGAGTGAAATCTCCTCAGAAATCATCAGCTCTCCAGGGACTAAGTCACCAACTCTAGTAGCAAGATTAATGGGTCTTGATCTTCTTCCAGATGCAGTACACTCATCATCATCTTCTTCTTCATCATCTATTTCCACTCCAAACAAACAAGGCCATCATCCTCATCATATGCACCACCACCTTAAACAAAGACAACACATTCAATTAATGAAGCATAGAAACAGCACAGGAAGTTACAATCACTCCTTGCATGACATTCCTAGAAGTTCAGATGTTGAACATAGAAGACTATCTCTCCAAATTAACAAAGAGAACATGGATTTGGATCTATCTCGGTTTTCATTTTCAAAAAGGAAATGCAATGATGAGAATTACAATTATAGCAGCAGAAGTCCAAGCTACTATGCTAGGCAAATTGTGAAACAGGTTAAAGAAAGTGTAACCAGGAAAGTTGGGGTTGACATCACTAACTCTGTCAAGAGCAGAGAGCAAGAAAGAGAAGAGTTTGTTAACCAATTGAGGATCAAGAAATCTCTCAAAAAATCAGCGAAGTCAATAGATGAATCAAGCCCAGGAAAGTACTCAAGCCAAACTCAGTCACCGAAACTCAGCAGATTCATGGACACTAAAAACAAACCAGGCACAAAACCATCATCACCACTTACCCCGAAGGATCAAAACACAATTCAAAAGCTGCAACCACCTTCACCAGTTGTCAACATTGAGGGACACGTTTCACGAGTTTTGACTAAGGCAATAAAGCCTCAAACATTGCCTGAGCAAGAGTGGCAGAAACAAAAGCTAGCCCCAGAGAACAAGAAAATAAGCAATGAGAGGTCCAGTTCAAGGATAAAGAAGCCTCAACAAACATCATCAACCCGAAAAAAACAAGAAGAAACATTTGTTATTCGTTCTCCACTATCATCAAGTAGAGGCAATGACATGAAAAAGAAAAGCAAGAGAACTCATCCATTGCAGAGCAATGTTCTCAATAACCTGAACACTAAAATTCTCCCTGTGAAGACAGACCCTTCTCCTCCAGCAACTAAAATTCCTCAAAAACAGAGGTACAAACAAGAAGCGTTGGCGCATACACACTCTGTCTGCGCCAGAGTAACCAACGATGAAAACAAACCTAACGCTGTCTCTACCATCACTGAAGAAGGACTCGAATTTCAGTACATCTCAACCATTCTAACTCGTACTACTACTGCCCCACACAAACACTTCAATTTTCAATGGTTCTCTCCTTCCCATCCATTGGACCCTTCAATTTTTCACCAACTTGAGCTTTACCCATCATACAATTCCATCTTTTCTTATCCCGGAAACTATAAATATAGCACCTTTACGCCGAATAGCCAAGTGGGTCCACGTTGTAACCGACGGTTACTGTTTGATTTGGTGGATGAATTGTTGTCAGAGATTGTGGTTAAACCAAAGTGGTGTAATTACGATGATGGGAAGTTGTTGTTGGAGAGAGTGTGGAAGAAGGTTAGGAGTTTCCCACGTGCGAAATGTGAGGTTCTTGAAGACATTGATAGATTGGTAGATATGGATGAAGGTGAAGGAGAAAGAGAAGAAGGGTTGGTGGCAGAGATTGAAGCGAAGATATTGGAGACGTTGGTGCATGAAACGGTTACCGTTATAGTTAGTGTCGTTTAA 2040 0.4127 MGKNVWYWSGSRSSKSKGGGTVETPEIPSGCMCALFQPFHFHPFHFNINNQQQQQQQQQQPPFNSSSHNIPQGLLSVPKGAEAPRNSLESEDGTASSISKDQNLKIPKNIRVKTSGASTRARGGNLSEISSEIISSPGTKSPTLVARLMGLDLLPDAVHSSSSSSSSSISTPNKQGHHPHHMHHHLKQRQHIQLMKHRNSTGSYNHSLHDIPRSSDVEHRRLSLQINKENMDLDLSRFSFSKRKCNDENYNYSSRSPSYYARQIVKQVKESVTRKVGVDITNSVKSREQEREEFVNQLRIKKSLKKSAKSIDESSPGKYSSQTQSPKLSRFMDTKNKPGTKPSSPLTPKDQNTIQKLQPPSPVVNIEGHVSRVLTKAIKPQTLPEQEWQKQKLAPENKKISNERSSSRIKKPQQTSSTRKKQEETFVIRSPLSSSRGNDMKKKSKRTHPLQSNVLNNLNTKILPVKTDPSPPATKIPQKQRYKQEALAHTHSVCARVTNDENKPNAVSTITEEGLEFQYISTILTRTTTAPHKHFNFQWFSPSHPLDPSIFHQLELYPSYNSIFSYPGNYKYSTFTPNSQVGPRCNRRLLFDLVDELLSEIVVKPKWCNYDDGKLLLERVWKKVRSFPRAKCEVLEDIDRLVDMDEGEGEREEGLVAEIEAKILETLVHETVTVIVSVV* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0039 679 MobiDBLite consensus disorder prediction 157 193 - -
Lan20g0039 679 Pfam Domain of unknown function (DUF4378) 516 670 IPR025486 -
Lan20g0039 679 MobiDBLite consensus disorder prediction 385 452 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 89 123 - -
Lan20g0039 679 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 677 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 391 406 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 50 73 - -
Lan20g0039 679 Pfam DUF761-associated sequence motif 131 159 IPR032795 -
Lan20g0039 679 MobiDBLite consensus disorder prediction 1 23 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 176 193 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 313 360 - -
Lan20g0039 679 PANTHER DUF4378 DOMAIN PROTEIN 1 677 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 157 175 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 307 364 - -
Lan20g0039 679 MobiDBLite consensus disorder prediction 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0039 Lan-Chr20 196967 200040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0039 136 673 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.950 3.30e-44 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0039 - - lang:109335605 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0813 8 10057289 10060940 Lan20g0039 20 196967 200040 LSH
Lan7g0907 7 8409039 8413010 Lan20g0039 20 196967 200040 PCT
Lan20g0039 20 196967 200040 Lan7g0907 7 8409039 8413010 PCT