Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0035 ATGCGATCTCGTAAAGTGGGTACGTCAGCAGGTCCATCACATAATGAGTTTGTAACCCCTTTCATCGCTTCCTCCGCCTCCGTCCTCTTCCTCCTCTTCCTCTGCCTCCGCTTCTTCACTCTCCGTCTCAAACGCACCACCCCTTCCTCCGACCCCCCTCATCACTACTCCTTCCATTCCCTCCGCCGTGCCACCAACTCCTTCTCCACTCGCATCGGCCATGGCGGCTTCGGCCCCGTCTTCTCCGCCCTTCTCCCTCCATCCTCCACACCCGTCGCCGTCAAGTTCATGGACTCCACTTCCTTACAAGGACAACGCGAGTTCCACAACGAACTCTTTTTCGCTCCCATGCTTCGTTCTTCTTACGTCGTTCCCCCTATTGGTTTTTGTTCTGAGCCTCAACGCCGTCGTTTTCTTCTTGTCTATCACCTCATGGATAATGGTAACCTCCACGATGCTCTTCTTCGTCGCAACTCTCCTCACTTCATTAATTGGAATAAGCGCTTTCATCTTATTTTTGACATTGCTAAAGGCATTCAGTATCTTCACTCTTTCGACACTCCTATTATTCATGGTGATATCAAGCCTAGTAATATTCTTCTCGATCGTTGTTTCTCTGCCAAGATTGCTGATTTCGGACTTGCTCAATTTAAAACCGATCAACTTCTGATTTCGGCTGTTGAGAGTGAGAATAAGATAAATCAAGAGTTAGATAGTGAAGTTGAGGATACAGAGTGTGTGACTGTATTGGCAGAGATGAGTTCTTTGAAGAAGAATCACAAAGGAAATGAGGTTAGAGTTTCATGTTCAGGTCCAGTCGTGAAGGATTATGTGATGGATTGGATTGGTAAAGAGGTGGAGAAGGAAATAGGGAAGGTTGAATTGGTAATCGGAGCCGACTCTAACAGTGGATCAAGTATTGGGAAGACTGGAAAAAACAAGAGCAAAAAGAAATTGGAATGGTGGGAATCAATGGATGAACAAAAGGAGGTTCTGAACAAGGTGAAGAGAAAGCCGGTTAGGGAATGGTGGAAGGAGGAGTATTCTCAGGATCTTGCTAAGGAGAAAAAGAAGAACAAGAAGAAACAACAACAATACAGAAATGGCGGAAATAGTGATGATGATTTGTGGGTCAGAGATGATGCTTTGTATAGTGATTTATATGTAAACAAGAGTAAAACAAAACACAGTAGAAGGAACAGTGGTAGTAGCGTAGATTCCTGGTTTCGTGGGATAAGTGGGGAGCTAAGAAGAGCTGGCAGGAATAGCTATGAGTCTGCAGCTAGTGGAGAAATTCCAAAGAGTGGTGTTAGCACTACTCCAAGTATGAGGGGGACTATGTTTTATGTTGCTCCTGAGTATGGCTATAATGGAGATGTATTATCCGAGAAATGTGATGTCTATAGTTTTGGTGTTCTATTGCTTGTTATCATTTCAGGGAGGCGTCCACTTCAGGTGATGACCAGTTCCCCAATATCAGAGTTTCAGCGAGCCAATCTCGTGTCTTGGGCACGCCTTTGTGCACGCAAGGGGAAGCTCATTGAATTGGTTGATCAGTCTATTCAGTCATTGGATAAAGAACAGGCTCTTTTATGCATCAAACTTGCCTTGCTGTGTTTGCAAAAGTCACCTGTTCGCCGTCCTTCAATGAATGAGGTTGTGGGAATGCTTAGTGGGGAATTGGAGCCACCTCAATTGCCAGTGGAGCACTCTTCTTCACCATCACACTTCCCGTTCAAGTCTAAAAAAGAAGAAAGCCGGAATGTCAACAACAACAACAGTAGCAGGGACTATCCATGGGAAATTTACACCTTGAAGGAGTTGCTTCGCGCAACAAATAACTTCCATCAAGATAACAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTGGGGCCGATCAAGTAAAGGCATCGAGATTGCAGTGAAGCGGTTGAAGGCAATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTGGAAGTACTTGGAAGGGTTAGGCATAAGAATTTGTTGGGATTGAGAGGATTCTACGCCGGAGGAGAAGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGCTTGCTCACCCATTTGCATGCTCATCTTGCTTCTCATTGTTTCCTAGATTGGCCTACAAGAATGAGAATAGCAATTGGATCAGCTGAAGGTTTGGCGTATTTGCACCATGAAGCAAATCCTCACATCATTCATAGAGACATAAAAGCAAGCAATGTTCTATTAGACAATGAATTTGAAGCTAAGGTTGCTGATTTTGGTTTTGCAAAGCTGATACCAGAGGGTGTAACACATGTGACTACAAGGGTTAAAGGCACCCTTGGATACTTGGCACCAGAATACGCCATGTGGGGCAAAGTTTCTGAAAGCTGTGATGTTTACAGCTTTGGGATTTTACTGATAGAGATTATTAGTGCCAAGAAACCGATTGAGAAACTCCCCGGTGGAGTGAAAAGGGATATTGTTCAGTGGGTGACACCTTATATACAGAAGGGTGTGTTCAATCATATTGCAGATGCAAAGTTGAAGGGGAAATTTGATATAGAGCAATTGAAATCTGTGATCACTATAGCTATGAGGTGCACTGATATTAGCCCTGATAAGAGGCCTAGCATGGAAGAAGTGGTGGAGTGGCTTAAGGGTAATGTAGGGAAGAGAAGAAAAGAAATTCTAACTTTGAGTTACAAGAATGGTGAAGATAATGATGAAAACTATGAAGAGATTGAAACAAAACATTCCAATTTGAAAGTAGTAAGTGAAAATGATAGGCATGTAATAAGATGA 2805 0.4349 MRSRKVGTSAGPSHNEFVTPFIASSASVLFLLFLCLRFFTLRLKRTTPSSDPPHHYSFHSLRRATNSFSTRIGHGGFGPVFSALLPPSSTPVAVKFMDSTSLQGQREFHNELFFAPMLRSSYVVPPIGFCSEPQRRRFLLVYHLMDNGNLHDALLRRNSPHFINWNKRFHLIFDIAKGIQYLHSFDTPIIHGDIKPSNILLDRCFSAKIADFGLAQFKTDQLLISAVESENKINQELDSEVEDTECVTVLAEMSSLKKNHKGNEVRVSCSGPVVKDYVMDWIGKEVEKEIGKVELVIGADSNSGSSIGKTGKNKSKKKLEWWESMDEQKEVLNKVKRKPVREWWKEEYSQDLAKEKKKNKKKQQQYRNGGNSDDDLWVRDDALYSDLYVNKSKTKHSRRNSGSSVDSWFRGISGELRRAGRNSYESAASGEIPKSGVSTTPSMRGTMFYVAPEYGYNGDVLSEKCDVYSFGVLLLVIISGRRPLQVMTSSPISEFQRANLVSWARLCARKGKLIELVDQSIQSLDKEQALLCIKLALLCLQKSPVRRPSMNEVVGMLSGELEPPQLPVEHSSSPSHFPFKSKKEESRNVNNNNSSRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRSSKGIEIAVKRLKAMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHAHLASHCFLDWPTRMRIAIGSAEGLAYLHHEANPHIIHRDIKASNVLLDNEFEAKVADFGFAKLIPEGVTHVTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLIEIISAKKPIEKLPGGVKRDIVQWVTPYIQKGVFNHIADAKLKGKFDIEQLKSVITIAMRCTDISPDKRPSMEEVVEWLKGNVGKRRKEILTLSYKNGEDNDENYEEIETKHSNLKVVSENDRHVIR* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0035 934 Gene3D Phosphorylase Kinase; domain 1 576 690 - -
Lan20g0035 934 SUPERFAMILY Protein kinase-like (PK-like) 597 892 IPR011009 -
Lan20g0035 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Lan20g0035 934 SMART serkin_6 615 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0035 934 SMART serkin_6 66 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0035 934 Coils Coil 345 365 - -
Lan20g0035 934 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 269 584 - -
Lan20g0035 934 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 774 890 - -
Lan20g0035 934 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 14 255 - -
Lan20g0035 934 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 594 769 - -
Lan20g0035 934 MobiDBLite consensus disorder prediction 576 590 - -
Lan20g0035 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Lan20g0035 934 Gene3D Transferase(Phosphotransferase) domain 1 691 900 - -
Lan20g0035 934 ProSiteProfiles Protein kinase domain profile. 66 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0035 934 MobiDBLite consensus disorder prediction 564 592 - -
Lan20g0035 934 Pfam Protein kinase domain 615 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0035 934 Pfam Protein kinase domain 440 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0035 934 Gene3D Transferase(Phosphotransferase) domain 1 419 565 - -
Lan20g0035 934 SUPERFAMILY Protein kinase-like (PK-like) 50 580 IPR011009 -
Lan20g0035 934 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Lan20g0035 934 ProSiteProfiles Protein kinase domain profile. 615 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0035 934 Pfam Protein tyrosine and serine/threonine kinase 68 219 IPR001245 GO:0004672|GO:0006468
Lan20g0035 934 Gene3D Transferase(Phosphotransferase) domain 1 55 239 - -
Lan20g0035 934 PANTHER OS07G0586332 PROTEIN 774 890 IPR044576 -
Lan20g0035 934 PANTHER OS07G0586332 PROTEIN 14 255 IPR044576 -
Lan20g0035 934 PANTHER OS07G0586332 PROTEIN 269 584 IPR044576 -
Lan20g0035 934 PANTHER OS07G0586332 PROTEIN 594 769 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0035 Lan-Chr20 174648 180521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0035 603 889 Receptor kinase-like Gene Family AT1G60800 44.637 1.47e-77 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lan20g0035 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0035 - - lang:109335602 1788.85