Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0034 ATGTCCAAGATTCCAATCACTTCAATGGAAAAGATGTCTTACATTCTAACAAGCTTTCTTATCTTGACTAGTATAACCTTATTTGCAAATGCTCAGCTTGTCAAGAAAACTTACATCATTCAAATGGACAAGTCAGCAATGCCAAACACCTTCTCCAATCACCTTGATTGGTACTCATCAAAAGTTCAATCAGTAGTTTCCAACTCAGTAGAAGCTGAGATGGACTATGAAGAGAGAATAATCTATACTTACCAAACTGCTTTTCATGGACTGGCTGCCAAGTTAAGCCAAGAAGAATCTGAGAAGCTAGAAGCAGAAGATGGTGTTTTGGCCATATTCCCTGATACAAAGTATGAGTTACACACCACAAGAAGTCCAACTTTCCTTGGTCTTGAAAATCTGCATCGTAGCACTAATAACATCGGGTCAAAAAAGTTAGTAGACCATGATGTTATAGTTGGAGTGTTAGACACTGGGATTTGGCCAGAAAGTGAAAGCTTCAATGACACAGGTTTGAGAGCAGTACCTTCTCACTGGAAAGGTGAATGTGAGACTGGTAGAGACTTCAGAAAAAGCCACTGCAATAAGAAGATTATAGGGGCAAGAATATTCTACCATGGATATGAAGCAGCAACAGGTAAATTTGATGAGCGAACAGAATACAAATCACCAAGAGATCAAGATGGTCATGGCACCCATACTGCAGCCACTGTTGCTGGATCTCCGGTGCATGGTGCTAACCTTCAAGGCTATGCTTATGGCACAGCAAGAGGAATGGCACCAGGTGCAAGGATTGCAGCTTATAAAGTGTGCTGGACTGGTGGATGCTTCAGCTCAGATATTCTATCAGCAGTTGATAAAGCTGTAGCTGATGGAGTGAATGTTCTATCCATCTCTTTGGGTGGTGGAATCTCCTCCTATTACCACGACAGTTTATCTGTGGCTGCATTTGGAGCAATGGAAAGAGGTGTTTTTGTTTCATGCTCAGCTGGAAATGCAGGACCTGAACCCGTTACCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTCCCTGCATATGTTAAGCTTGGGAATGGTGTAAATGTTACTGGAGTCTCACTCTATAAAGGGAGAAACATGTTATCTGCTAAGAAACAATATCCTTTGATATACATGGGAAGTAATTCCACCAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGAACTTTAGATCCAAAAAGAGTTTCAGGAAAGATTGTGATTTGTGATAGAGGGATTAGTCCAAGGGTGCAGAAGGGCCAGGTGGTGAAAAATGCTGGGGGATTAGGAATGGTTCTTACAAACACTGCAGCTAATGGAGAAGAACTTGTTGCTGATTGTCACCTCATTCCAGCAGTTGCTATAGGAGAGAAAGAAGGTAAAGAACTTAAAGATTATGTTTTGACAAGTAGAAAAGCTACTGCAAATCTAGCTTTTTTGAACACAAGGTTGGGAATTAGACCTTCTCCTGTAGTAGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCACCCTTGAGATTTTGAAGCCTGATGTTGTGGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGAGCCATTGGTCCGTCAAGTTTATCAACAGATCATAGGAGAGTTAAGTTCAATATACTTTCTGGAACTTCAATGTCATGTCCACATGTAAGTGGCATTGCAGCATTGGTGAAGTCTAAGCATCCAGAATGGAGTCCAGCTGCTATAAAATCTGCTCTGATGACAACAGCTTATGTTCATGACAACACCATCAAGCCTCTTAGAGATGCTTCAACTGCTGCATCTTCAACTCCTTATGATCATGGTGCTGGACACATCAACCCTTCAAGAGCTCTTGATCCAGGTTTAGTCTATGACATCGAGCCAAAGGATTACTTTGAGTTCCTGTGTACACAGAAGCAAAGTCAAGCACAATTAGCAGTTTTTGGCAAATATTCAAACAGGTCTTGCACACACTCTCTTGCAAGTCCTGGTGACTTGAACTACCCTGCCATATCAGTAGTGTTTCCAGAGCAAAAATCCATTTCAGTTTTAACAAGTCACAGAACTGCCACCAATGTTGGCCCTCCTGTTTCTAAATACCATGTTGTTGTTTCAGCATTCAAAGGTGCTTCTCTCAAAGTTGTCCCAGACACCTTGAATTTCACTAGAAAATACCAGAAACTATCTTACAAGGTTATCTTCACTGCAAAATCTAGGCCAGAAGAACCTGAATTTGGAGGCCTGGTATGGAAGGATGGTGTGCACAAGGTTAGAAGCCCAATAGTGATAACATATATGGCTCCAATATGA 2349 0.4181 MSKIPITSMEKMSYILTSFLILTSITLFANAQLVKKTYIIQMDKSAMPNTFSNHLDWYSSKVQSVVSNSVEAEMDYEERIIYTYQTAFHGLAAKLSQEESEKLEAEDGVLAIFPDTKYELHTTRSPTFLGLENLHRSTNNIGSKKLVDHDVIVGVLDTGIWPESESFNDTGLRAVPSHWKGECETGRDFRKSHCNKKIIGARIFYHGYEAATGKFDERTEYKSPRDQDGHGTHTAATVAGSPVHGANLQGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDKAVADGVNVLSISLGGGISSYYHDSLSVAAFGAMERGVFVSCSAGNAGPEPVTLTNVSPWITTVGASTMDRDFPAYVKLGNGVNVTGVSLYKGRNMLSAKKQYPLIYMGSNSTSPDPRSLCLEGTLDPKRVSGKIVICDRGISPRVQKGQVVKNAGGLGMVLTNTAANGEELVADCHLIPAVAIGEKEGKELKDYVLTSRKATANLAFLNTRLGIRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSGAIGPSSLSTDHRRVKFNILSGTSMSCPHVSGIAALVKSKHPEWSPAAIKSALMTTAYVHDNTIKPLRDASTAASSTPYDHGAGHINPSRALDPGLVYDIEPKDYFEFLCTQKQSQAQLAVFGKYSNRSCTHSLASPGDLNYPAISVVFPEQKSISVLTSHRTATNVGPPVSKYHVVVSAFKGASLKVVPDTLNFTRKYQKLSYKVIFTAKSRPEEPEFGGLVWKDGVHKVRSPIVITYMAPI* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0034 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Lan20g0034 782 Pfam Subtilase family 149 601 IPR000209 GO:0006508|GO:0008236
Lan20g0034 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 121 IPR037045 -
Lan20g0034 782 ProSiteProfiles Serine proteases, subtilase domain profile. 128 631 - -
Lan20g0034 782 SUPERFAMILY Subtilisin-like 120 635 IPR036852 GO:0004252|GO:0006508
Lan20g0034 782 Gene3D Peptidase S8/S53 domain 150 644 IPR036852 GO:0004252|GO:0006508
Lan20g0034 782 Gene3D - 356 499 - -
Lan20g0034 782 Pfam Peptidase inhibitor I9 37 121 IPR010259 -
Lan20g0034 782 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 25 777 - -
Lan20g0034 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 777 IPR045051 -
Lan20g0034 782 CDD PA_subtilisin_like 362 490 - -
Lan20g0034 782 Gene3D - 648 779 - -
Lan20g0034 782 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Lan20g0034 782 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lan20g0034 782 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Lan20g0034 782 Pfam Fibronectin type-III domain 678 776 IPR041469 -
Lan20g0034 782 CDD Peptidases_S8_3 118 597 IPR034197 -
Lan20g0034 782 Pfam PA domain 389 478 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0034 Lan-Chr20 171366 174354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0034 19 782 Subtilisin-like Serine Gene Family AT5G51750 70.000 0.0 1133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0034 - - lang:109354646 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0814 8 10067437 10070118 Lan20g0034 20 171366 174354 LSH
Lan13g0796 13 8608915 8611550 Lan20g0034 20 171366 174354 PCT
Lan20g0034 20 171366 174354 Lan13g0796 13 8608915 8611550 PCT