Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0018 ATGTTAGACTCCATTCCTGAAGAACTCAGAATTAACATCTTACAAAGACTCTATGGTCCTCTGATATCTGGTAACGAAGTATTGCATGACATTTCAAATGAAGGATATATTAAATGGGTGCCAAAGCTAATCATTGAACATCATCCGAGAGAAGCAACAGTGATATCACTTAATCAAATATGCACACATTTCTACATATTAGTCTCCGGTGAAGTGGAATTACTATCTGAAGATGAAAATGGAAGTGTGCATAGGGTTGTACTTCTTGCAAATAGCCTTCTTGGTGAGGTTGGAGTACTTTACTGTGAGAGGCACCCCTTCACAATTCGGACTAGGACACTGAGTCATATGGTGAAGGTTAATCGTAAGACAATTATAGACATAGGTATGACTCATGCTGATGACATACGCCTTATTATGACCAATCATTGTCAGTATCTAAGCCAACATCCTATAATGAAGAGAGCTTCAGAGATGAGAAGATACACTCTTACTAGACCACCGATAGATCTCCCTCTAACCCTTTGTAGTGCTGTATCAGCAACGGGAGACGACGATGGCTTAGTCACCAGGTTATTACAATGGGGTTGGGATGTCAATGAACGTGATGAAACAGGGAAGAGTGCATTGTACCTAGCAGTCTCTATGACAAAAACAAGACGCCTCAATTGCTTGTTGGAGAATGGGGCAGATCCTAACATTAAAGATTTTAATGGCAAGCTACCATTATGGGAGGCACTGCAGCATGGGGACAAACCAATGAGAGATACGTTGATAAGATATGGAACTATCTTAGAAGAACGTGTTAAGGATGAATATGCGCATAGTTCTAATGCACTGAATGATAACAATTTGATGGATGAGATATTGCATTATGATGTCACCCTCCCTACAATAGCAAGCATCGTGGAAGAATGCCATGAATATGAGTGCAGTGTTCATATTAGAGATCCTTATATGGAAGAACGCCGTAGGTATAGATCAAAGGGGAAGGCTCTTGCTCATATGTGA 1011 0.4036 MLDSIPEELRINILQRLYGPLISGNEVLHDISNEGYIKWVPKLIIEHHPREATVISLNQICTHFYILVSGEVELLSEDENGSVHRVVLLANSLLGEVGVLYCERHPFTIRTRTLSHMVKVNRKTIIDIGMTHADDIRLIMTNHCQYLSQHPIMKRASEMRRYTLTRPPIDLPLTLCSAVSATGDDDGLVTRLLQWGWDVNERDETGKSALYLAVSMTKTRRLNCLLENGADPNIKDFNGKLPLWEALQHGDKPMRDTLIRYGTILEERVKDEYAHSSNALNDNNLMDEILHYDVTLPTIASIVEECHEYECSVHIRDPYMEERRRYRSKGKALAHM* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0018 336 ProSiteProfiles Ankyrin repeat region circular profile. 205 236 - -
Lan20g0018 336 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 2 295 - -
Lan20g0018 336 SMART ANK_2a 205 234 IPR002110 GO:0005515
Lan20g0018 336 SMART ANK_2a 238 267 IPR002110 GO:0005515
Lan20g0018 336 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Lan20g0018 336 SUPERFAMILY cAMP-binding domain-like 2 147 IPR018490 -
Lan20g0018 336 CDD CAP_ED 38 140 IPR000595 -
Lan20g0018 336 SUPERFAMILY Ankyrin repeat 24 269 IPR036770 -
Lan20g0018 336 PANTHER POTASSIUM CHANNEL AKT1 2 295 IPR045319 GO:0005249|GO:0006813
Lan20g0018 336 SMART cnmp_10 27 147 IPR000595 -
Lan20g0018 336 Gene3D Jelly Rolls 1 162 IPR014710 -
Lan20g0018 336 ProSiteProfiles cAMP/cGMP binding motif profile. 27 146 IPR000595 -
Lan20g0018 336 Pfam Cyclic nucleotide-binding domain 47 130 IPR000595 -
Lan20g0018 336 Gene3D - 173 323 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0018 Lan-Chr20 88310 91191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0018 1 297 Ion Channels AT2G25600 34.967 4.47e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0018 K21867 - lang:109335619 686.411