Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0013 ATGGGGAAAACAAGCAAATGGTTTAGAAACTTGTTGAAAGGGAAGAAAGAGAAGAAGGAAAAAGATGAAAGTGCAAGTGACATGAATTGTTCTTCAAATGGAACAGAAAATCCAAAGGAGAAAGAGAGAGGGAGTTTAAGGAGATCACCAGCCAAAGAGACAACACCAAGAGGTTCCTTAACAAATTTGGTAGAATCATCAAATGTCACAGTTTCATCACAGAATGAGCATACCATGGCGCATGGAACACCTGTTACAACAATTCAAGAGGCTGCTGCCATTAAAATTCAGTCCATCTTTCGCTCTCACTTGGCAAGAAAAGCATTGTGTGCTCTTAGGGGATTAGTCAAGTTGCAAGCACTAGTAAGGGGTCACTTGGTGAGAAAACAAGCCAAGGCAACACTAAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAACGGATCCGAATTGGATTACAAAGAAAACAGGATCAAAAGCAGTCAACCTATACAAATACCTCAGCATATGATTTATTCAGGCATATCTGTGATGAAATGGACAGAGGCTTGGAAGACAAAATCAAGATGGTGGAAATGGATGTTTGTGAATCAAAAGGTAAGTCCAGAAGCAGAATCACCAATGCATATCATCAGGATCAATATGAGCATGGATTTTCCACATATTATTCAAACAATAGTCCACACTCAAAGGAAGAGAACTACAAGGTATCACCAGCTCCTTCAGATTTAACAGGACTGAGTGCAAGAGCTTGCAGTGGCCACTTCGAGGAGTGTTTCAGCACAGCACATAGCAGCCCTCAAGGCCAATACTATGCTGTGTCTAAAGATAATGAAGATTCATTGCAGCCTTTTGCTTTTCCTAAGCCACCATATACAGAATCTATCATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAATACTGAATCCTCAAGGGCCAAAGTCAGATCACAAAGTGCACCAAAACAAAGGCCAGATTCATTTGAGAGGCAACTGAGCCGGGGAAGATTTTCAATAGAAGGAAGAAATGTGCCTAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTGAGTGTCACTGCACAGAATTATCAGGATCCATGGTCAATCAAACTTAACAAATCAACAGTTTCACACAAAGATAGTGAGTGTGGCTCTACAAGTACAGTGATCACAACAAAAATAATAAATTCTCCTTTCACAATGTCTTTGCAAGGGATTTGA 1245 0.4129 MGKTSKWFRNLLKGKKEKKEKDESASDMNCSSNGTENPKEKERGSLRRSPAKETTPRGSLTNLVESSNVTVSSQNEHTMAHGTPVTTIQEAAAIKIQSIFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRIGLQRKQDQKQSTYTNTSAYDLFRHICDEMDRGLEDKIKMVEMDVCESKGKSRSRITNAYHQDQYEHGFSTYYSNNSPHSKEENYKVSPAPSDLTGLSARACSGHFEECFSTAHSSPQGQYYAVSKDNEDSLQPFAFPKPPYTESIMSYDYPLFPNYMANTESSRAKVRSQSAPKQRPDSFERQLSRGRFSIEGRNVPRPVRMQRSSSHVSVTAQNYQDPWSIKLNKSTVSHKDSECGSTSTVITTKIINSPFTMSLQGI* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0013 414 PANTHER IQ-DOMAIN 5-RELATED 1 394 - -
Lan20g0013 414 MobiDBLite consensus disorder prediction 319 333 - -
Lan20g0013 414 MobiDBLite consensus disorder prediction 36 50 - -
Lan20g0013 414 Gene3D - 88 136 - -
Lan20g0013 414 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Lan20g0013 414 SMART iq_5 111 132 IPR000048 GO:0005515
Lan20g0013 414 SMART iq_5 88 110 IPR000048 GO:0005515
Lan20g0013 414 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 394 - -
Lan20g0013 414 Pfam Protein of unknown function (DUF4005) 288 347 IPR025064 -
Lan20g0013 414 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Lan20g0013 414 MobiDBLite consensus disorder prediction 10 26 - -
Lan20g0013 414 MobiDBLite consensus disorder prediction 319 345 - -
Lan20g0013 414 MobiDBLite consensus disorder prediction 1 59 - -
Lan20g0013 414 Pfam IQ calmodulin-binding motif 91 109 IPR000048 GO:0005515
Lan20g0013 414 Pfam IQ calmodulin-binding motif 116 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0013 Lan-Chr20 55577 57984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0013 1 399 IQD Protein Family AT4G14750 45.183 3.52e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0013 - - gmx:100817667 466.077