Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan1g2094 | ATGTTGGACTATGAATGGGGCAACCAATCATACATGATGCTTACACCAAATGAAGACGGCTCCTCCTCCTCCTCCGCCACCACCACCACCACCGCCTCCGACCAAGCCCACCGCCAAATCTTTGACCACTATGCTTCTCACAACTTCTTACCTGACTACTTCCTTCACGGGCCTGGGCCCACAAACACCACCACAACAACTAACATTGATTTTTCTCACCACCAACAACACTTCAACCCACAAGCCCATCCAACGTTTTTTGACCCACGCGCCTACCATGCCGCGTCATCAACTTACTACCCTCCTCTACAACCTTCCATTCTCTCACTTGACCCCATGTCTCATGCCAATTCCGGGCCCGAGCCCAGGCCCGGGTACATTGTGGTGCCTAAGTCAGAGGATATGGTCCGGACAATGGATTTTGCTGGCTCACGACTTGGGCTTAACCTCGGAGGGCGAACTTACTTTTCATCCTCCGAGGATAATTTCGTGAGTCAGCTTTATCACAGGTCCAGGCCAGCCGAATTGAGTTCGACAGTATCGTCGAACTCACCTCGATGCCAGGCGGAGGGATGCAATGCTGATCTGTCACAGGCGAAGCACTACCACAGGAGGCATAAGGTGTGCGAGTTTCACTCTAAGGCTTCTACGGTCATTGCTGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTGTATCTGAATTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTAGCAGATCATAATCGTCGTAGAAGAAAAACTCAACAACCAACTCAACAAGTTGAAGCTCACTGTTTTTCACAAGTGGGTAATAATGCATGTAGGAGCATAAATTAA | 858 | 0.4977 | MLDYEWGNQSYMMLTPNEDGSSSSSATTTTTASDQAHRQIFDHYASHNFLPDYFLHGPGPTNTTTTTNIDFSHHQQHFNPQAHPTFFDPRAYHAASSTYYPPLQPSILSLDPMSHANSGPEPRPGYIVVPKSEDMVRTMDFAGSRLGLNLGGRTYFSSSEDNFVSQLYHRSRPAELSSTVSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLVSEFDNGKRSCRKRLADHNRRRRKTQQPTQQVEAHCFSQVGNNACRSIN* | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan1g2094 | 285 | ProSiteProfiles | Zinc finger SBP-type profile. | 184 | 261 | IPR004333 | GO:0003677 | |
Lan1g2094 | 285 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 | 101 | 268 | - | - | |
Lan1g2094 | 285 | MobiDBLite | consensus disorder prediction | 13 | 34 | - | - | |
Lan1g2094 | 285 | SUPERFAMILY | SBT domain | 185 | 265 | IPR036893 | GO:0003677|GO:0005634 | |
Lan1g2094 | 285 | Pfam | SBP domain | 187 | 260 | IPR004333 | GO:0003677 | |
Lan1g2094 | 285 | Gene3D | - | 177 | 248 | IPR036893 | GO:0003677|GO:0005634 | |
Lan1g2094 | 285 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 101 | 268 | IPR044817 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan1g2094 | Lan-Chr1 | 36448860 | 36450574 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan1g2094 | 127 | 234 | SBP-box Gene Family | AT1G02065 | 70.370 | 1.54e-50 | 165 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SBP | Lan1g2094 | SBP | 9.8e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan1g2094 | - | - | gmx:100778566 | 385.185 |