Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2094 ATGTTGGACTATGAATGGGGCAACCAATCATACATGATGCTTACACCAAATGAAGACGGCTCCTCCTCCTCCTCCGCCACCACCACCACCACCGCCTCCGACCAAGCCCACCGCCAAATCTTTGACCACTATGCTTCTCACAACTTCTTACCTGACTACTTCCTTCACGGGCCTGGGCCCACAAACACCACCACAACAACTAACATTGATTTTTCTCACCACCAACAACACTTCAACCCACAAGCCCATCCAACGTTTTTTGACCCACGCGCCTACCATGCCGCGTCATCAACTTACTACCCTCCTCTACAACCTTCCATTCTCTCACTTGACCCCATGTCTCATGCCAATTCCGGGCCCGAGCCCAGGCCCGGGTACATTGTGGTGCCTAAGTCAGAGGATATGGTCCGGACAATGGATTTTGCTGGCTCACGACTTGGGCTTAACCTCGGAGGGCGAACTTACTTTTCATCCTCCGAGGATAATTTCGTGAGTCAGCTTTATCACAGGTCCAGGCCAGCCGAATTGAGTTCGACAGTATCGTCGAACTCACCTCGATGCCAGGCGGAGGGATGCAATGCTGATCTGTCACAGGCGAAGCACTACCACAGGAGGCATAAGGTGTGCGAGTTTCACTCTAAGGCTTCTACGGTCATTGCTGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTGTATCTGAATTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTAGCAGATCATAATCGTCGTAGAAGAAAAACTCAACAACCAACTCAACAAGTTGAAGCTCACTGTTTTTCACAAGTGGGTAATAATGCATGTAGGAGCATAAATTAA 858 0.4977 MLDYEWGNQSYMMLTPNEDGSSSSSATTTTTASDQAHRQIFDHYASHNFLPDYFLHGPGPTNTTTTTNIDFSHHQQHFNPQAHPTFFDPRAYHAASSTYYPPLQPSILSLDPMSHANSGPEPRPGYIVVPKSEDMVRTMDFAGSRLGLNLGGRTYFSSSEDNFVSQLYHRSRPAELSSTVSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLVSEFDNGKRSCRKRLADHNRRRRKTQQPTQQVEAHCFSQVGNNACRSIN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2094 285 ProSiteProfiles Zinc finger SBP-type profile. 184 261 IPR004333 GO:0003677
Lan1g2094 285 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 101 268 - -
Lan1g2094 285 MobiDBLite consensus disorder prediction 13 34 - -
Lan1g2094 285 SUPERFAMILY SBT domain 185 265 IPR036893 GO:0003677|GO:0005634
Lan1g2094 285 Pfam SBP domain 187 260 IPR004333 GO:0003677
Lan1g2094 285 Gene3D - 177 248 IPR036893 GO:0003677|GO:0005634
Lan1g2094 285 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 101 268 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2094 Lan-Chr1 36448860 36450574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2094 127 234 SBP-box Gene Family AT1G02065 70.370 1.54e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan1g2094 SBP 9.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2094 - - gmx:100778566 385.185