Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2092 ATGTTTGGACGTGGACCAAGGAAGAGTGATAGCACCAAATATTATGAAGTTCTCGGTGTTTCGAAAAGTGCTAATGAAGATGAAATCAAGAAGGCTTATAGAAAGGCAGCAATGAAGAACCATCCAGATAAGGGTGGAGATCCTGAGAAGTTCAAGGAATTAGCTCAAGCTTATGAAGTCTTGAGCGATCCTGAAAAGAGAGATGTGTATGACCAATATGGTGAAGATGCCCTTAAAGAAGGAATGGGGGGAGGAGGAGGGGGAGGCCATAATCCCTTTGATATATTTGAATCATTTTTTGGAGCAAGCTTTGGTGGAGGTGGTAGTTCACGAGGTAGAAGACAGATGCAGGGTGAAGATGTGGTTCAATCTTTAAAGGTTTCCTTGGAGGACGTGTACAATGGCACAACAAAGAAATTATCCCTATCTAGAAATGTGTTATGCTCAAAATGTAAAGGGAAAGGTTCCAAAAGTGGAAATGCTGGTAAGTGTTTTGGATGCCAAGGTACAGGTATGAAGATTACGACAAGGCAGATTGGACTTGGCATGATCCAACAAATGCAACATGTCTGTTCTGACTGCAGAGGATCTGGTGAGGTCATTAGCGATAGAGATAGATGCCCTCCATGCAAGGGTAAGAAGGTTACCCAGGAAAAGAAGGTGCTGGAGGTGCATGTTGAGAAGGGGATGCAGCATGGTCAGAAGATTACATTTGAAGGACAAGCCGATGAAGCTCCTGACACCATCACTGGAGACATTGTTTTTGTCTTACAAGTAAAGGACCATCCGAGGTTCAAGAGGGACGGTGATGACCTACATATTGATCACAATCTCAGCTTGACTGAAGCGCTTTGTGGCTTCCAGTTTGCTATCACCCATCTTGATGGGAGACAACTATTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGCCAACACAAAGCAATAAATGATGAGGGAATGCCACACCATAATAGGCCCTTCATGAAGGGTAGCCTTTACATCAAGTTCAATGTTGATTTCCCAGAATCCAGGTTCCTTTCTCCTGACAAATGCCGGTTATTAGAAACGATACTACCACACAAGACCAAGAAGCAATTGACAGCGATGGAGCTGGATGATTGTGAGGAGACTACTTTGCGTGATGTCAACATGAAGGAGGAAGATATGAGACGAAAGAGGCAACATCGAGGTCATCCATCGTCTAGAACGCACGAGCATGATTATGATGATGACGATGATGATGAGCCATCCGGGCCACAAGTGCAATGTGCTCAACAGTAG 1287 0.4429 MFGRGPRKSDSTKYYEVLGVSKSANEDEIKKAYRKAAMKNHPDKGGDPEKFKELAQAYEVLSDPEKRDVYDQYGEDALKEGMGGGGGGGHNPFDIFESFFGASFGGGGSSRGRRQMQGEDVVQSLKVSLEDVYNGTTKKLSLSRNVLCSKCKGKGSKSGNAGKCFGCQGTGMKITTRQIGLGMIQQMQHVCSDCRGSGEVISDRDRCPPCKGKKVTQEKKVLEVHVEKGMQHGQKITFEGQADEAPDTITGDIVFVLQVKDHPRFKRDGDDLHIDHNLSLTEALCGFQFAITHLDGRQLLIKSNPGEVIKPGQHKAINDEGMPHHNRPFMKGSLYIKFNVDFPESRFLSPDKCRLLETILPHKTKKQLTAMELDDCEETTLRDVNMKEEDMRRKRQHRGHPSSRTHEHDYDDDDDDEPSGPQVQCAQQ* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2092 428 SMART dnaj_3 12 66 IPR001623 -
Lan1g2092 428 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 428 IPR044713 GO:0006457|GO:0030544
Lan1g2092 428 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Lan1g2092 428 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 145 217 IPR036410 -
Lan1g2092 428 CDD DnaJ 14 63 IPR001623 -
Lan1g2092 428 Gene3D DnaJ domain 10 110 IPR036869 -
Lan1g2092 428 PRINTS DnaJ domain signature 15 33 IPR001623 -
Lan1g2092 428 PRINTS DnaJ domain signature 46 66 IPR001623 -
Lan1g2092 428 PRINTS DnaJ domain signature 66 85 IPR001623 -
Lan1g2092 428 MobiDBLite consensus disorder prediction 387 428 - -
Lan1g2092 428 Hamap Chaperone protein DnaJ [dnaJ]. 10 384 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan1g2092 428 CDD DnaJ_C 119 345 - -
Lan1g2092 428 CDD DnaJ_zf 148 214 IPR001305 GO:0031072|GO:0051082
Lan1g2092 428 Gene3D - 111 262 - -
Lan1g2092 428 MobiDBLite consensus disorder prediction 387 409 - -
Lan1g2092 428 Gene3D - 148 214 - -
Lan1g2092 428 Pfam DnaJ domain 13 71 IPR001623 -
Lan1g2092 428 Gene3D - 263 344 - -
Lan1g2092 428 ProSiteProfiles Zinc finger CR-type profile. 135 219 IPR001305 GO:0031072|GO:0051082
Lan1g2092 428 SUPERFAMILY Chaperone J-domain 9 110 IPR036869 -
Lan1g2092 428 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Lan1g2092 428 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 345 IPR008971 GO:0006457|GO:0051082
Lan1g2092 428 Pfam DnaJ C terminal domain 124 343 IPR002939 -
Lan1g2092 428 SUPERFAMILY HSP40/DnaJ peptide-binding domain 119 263 IPR008971 GO:0006457|GO:0051082
Lan1g2092 428 PANTHER DNAJ PROTEIN HOMOLOG 2-LIKE ISOFORM X1 7 428 - -
Lan1g2092 428 Pfam DnaJ central domain 148 214 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2092 Lan-Chr1 36433654 36437712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2092 14 73 C2H2 Transcription Factor Family AT1G74250 47.826 2.45e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2092 K09503 - gmx:100800590 657.136