Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2083 ATGTTCATGAAATCAATGATATTACTCTACCGCCATGTCTCAACCACCAAAGTTTTCTCAAAACTCCCTCCAAAATCGAAGCAACTTGCTTTAACACAAGCCCAACAAGTCCTCACTGATTATCTTCATGCTACAAGATCTCTTCCTTATCCCTATGCTGATCAAATTGCCAAAAATTCATTCCTTTCTCTCTCTAATCTTATTTCCAAACTCCAAGGTGGTTCCTTTAGTTTCAAATCCCTTGTTAAGTTCCTTAGGTACAACCCCATTAATGAGTTTGAGTTTTTCTTTGAGAGTATTGGTATAAATTACTCCAAAGTTCATTCCTTTTTGCCTCATAACAAGTTCTTCTTTTCTGAAGATGGGTCTCTTCTTGATGCTGCTGCTGTGCTTTCTGAATTTGGGTTCCCTTGGGATAAGCTTGGATTGTTGTATGTGGAAACTGGTGGGTCTGTGTTTAAGAGGAGTGTTTTTGAGTTAAAGGGTAGGCTTTGTTTTTTCAAAAGATATGGTTTTTGTAATGTTCAAGTCATTGGGGTGTGTTTGGCTTTTCCTTTTGTTTTTCGTGACGACGAGGAACATGGTTCTCAATTTCATGGGTTGTTGGATGATTTGAAGTTGGTTTTCTTGGATTTTGATTTGGCTGCGTCTGTTGAGGGGAGTGTGGATTCATGGTATGAGGTGTGTAGGAAAATTCGGGTTTTTTATGATTTGAATGATGGGAAGTATAAGATAGGGGAACTCATCGGAAGGAATAAGAGTGTCATTCTTGAGCATGGAGAGGAGGAGTTGATTCGCAAAGTCGAGTATTTCTGTAGATTTGGTGTGAAGAAGGAGGAAGTTGCTTTGTTGATTCTACAGAGTTCGGAGTTGTTGAATATCAATTTGGAGACGCCGGTGATTAATGTATTGAAGTTGTTGAAACACGTCGGTCTAAGCTCTGAAGGTCTCAAGGATGTAAGGCGGAATTATGTTCATGCGTTGGGAACAATTAAAATGTCGAATCTGCCTAGTGTAATGAGGGCTTTGAGTTTACACGAGTGGTTCTTTAATAAACTCAAGGATGGGGATCATCATTTGTTACCGAGTTACATCACAACCTATCCAAATGAAGGCCAAGATAAAGATTATCAACGCGGTTTAGAGACAATCCGTGTTTCAAGAACCCCGATTCACAATATGAATAAGTTGAATTTCTTGCATGCCTTGGGCTTTGGAGAAAATGGTTTCACCATGAGTATCTTAAATGACTTGCATGGAAATGTTAGTGAGTTGCAGGAACGATTCGATTGCCTCATGAATTCAGGGATCGAATTCTCAAAGGTCTGTAAGATGATCACTATTCGACCAAGGATTCTAAGCCAAAACCCTGAAATTTTAGTGCAGAAGATTAATTTTCTCTGTCAGGATATGGGAAATAACATAGAGATTTTGGTCGCTTTCCCGGCATACTTATGTCATGATTTAGAGAGCCGCATTAAGCCTAGATATAGATTCCATATGTGGGTTAAAGAAAGGGGTCTGACTAAGAAAAACTATTCCATTGCGAGCATGATTGCAACTAGTAACAAGAATTTCGTTGCTCGTATTTCTAGAATTCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCCTAGGAAATTGTCAGTAGAATGA 1662 0.3905 MFMKSMILLYRHVSTTKVFSKLPPKSKQLALTQAQQVLTDYLHATRSLPYPYADQIAKNSFLSLSNLISKLQGGSFSFKSLVKFLRYNPINEFEFFFESIGINYSKVHSFLPHNKFFFSEDGSLLDAAAVLSEFGFPWDKLGLLYVETGGSVFKRSVFELKGRLCFFKRYGFCNVQVIGVCLAFPFVFRDDEEHGSQFHGLLDDLKLVFLDFDLAASVEGSVDSWYEVCRKIRVFYDLNDGKYKIGELIGRNKSVILEHGEEELIRKVEYFCRFGVKKEEVALLILQSSELLNINLETPVINVLKLLKHVGLSSEGLKDVRRNYVHALGTIKMSNLPSVMRALSLHEWFFNKLKDGDHHLLPSYITTYPNEGQDKDYQRGLETIRVSRTPIHNMNKLNFLHALGFGENGFTMSILNDLHGNVSELQERFDCLMNSGIEFSKVCKMITIRPRILSQNPEILVQKINFLCQDMGNNIEILVAFPAYLCHDLESRIKPRYRFHMWVKERGLTKKNYSIASMIATSNKNFVARISRIHPAAPKHWFEQFYPRKLSVE* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2083 553 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Lan1g2083 553 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Lan1g2083 553 SMART mt_12 475 509 IPR003690 GO:0003690|GO:0006355
Lan1g2083 553 SMART mt_12 443 474 IPR003690 GO:0003690|GO:0006355
Lan1g2083 553 Pfam mTERF 228 324 IPR003690 GO:0003690|GO:0006355
Lan1g2083 553 Pfam mTERF 423 526 IPR003690 GO:0003690|GO:0006355
Lan1g2083 553 Gene3D Transcription termination factor 3, mitochondrial 67 208 IPR038538 -
Lan1g2083 553 Gene3D Transcription termination factor 3, mitochondrial 217 352 IPR038538 -
Lan1g2083 553 Gene3D Transcription termination factor 3, mitochondrial 380 545 IPR038538 -
Lan1g2083 553 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 17 546 - -
Lan1g2083 553 PANTHER CGI-12 PROTEIN-RELATED 17 546 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2083 Lan-Chr1 36083317 36085536 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan1g2083 mTERF 4.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2083 - - gmx:100812245 677.937