Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2072 ATGGAGAGGGTTGCAGAGCCGAAGGGAGTTCCTCTGACCTCGCCTATCCGATTTGAGGTATCAAATTCGAAGATGGTTGCATCAAGAGAGATGAGTCAGAGACTACATAGGCAGGAGGAGGCTTCAAGAGGAAGGGACGTGCCTACGGCGCGCCTGTTATCGGATGCTGCACGGATGATTTTGATTAGAGATGATATAGGATTTGATAGTCGAGCCTCTCAAGAAATGTCGGAAGGAAAGGCTTCTTTAGTAGAATCGGAAGAGCTGATGGCTGACGTTGAGACATCCAATGGAAGCAGTGATTCATTTGAGGATGGTGGTTCAGGTTCATTTGCTGGAGCTAGTCATCCCCCAGAACCCGTTGATACCGATCTTATGAAAACGGTTTATATACCGTTAGGACAAAAAGATACCCAACTTATGAGAACGGTTTATGTACCGATTTGTCAAAATAAACCCGAGGCTGGATGCTTAATGAACAGCTTCTCCATGAAGGGCCCGTTCCAGGAAGATCTCTCAATTGGTATTCCTACCAAGAAACCAAGTCCCAATGTTCTTTCCTCTGAAGACAGTTTGACTGAAGAACTAAGCGACACGGGGAATTTATCAACACCATTTTCAGGTGCTCGAGCATCGCAGAATACCGAGAACTCTCTCCTCCCTCCAGATTCCGAGGAAAAGGAAATTGTGTGGGATGCTTCTTTGCCTCCGAGTGGCAATGTCAGTCCACTTAGTAGCATCGATAGTACTAGTGTTGTCAAAGCAATGAGTATGGTTAATAGTAATGCTAGTACATATCGGAGTGACGCATTCACCAGTGATGGCATGCTTAGTTTAGAGAAAATGAGTATACGGGGGGATTCACTAGAGAGTGCAAAAACCAGTGGTAGTCGAGTAAGTGATAGCAGTGGCCTCAGTGATGACAGCCACTGGAGCAACATAACGGGTAGCGCCAATAAGCCTCACAAGGGAAATGATCCTAGGTGGAAGTCTATCCTTGCCATCCGATCACGGGATGGAATTTTGGGCATGAGTCATTTTAAGTTACTCAAAAGACTTGGATGCGGCGATATTGGAAGTGTATATCTCTCGGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCCTAGCGAGCAGAAAGAAGCTGACAAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGATCATCCATTTCTACCAACTTTGTATACACATTTCGAGACCGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCTGGAGGTGATCTGCACACTTTAAGGCAGCGGCAACCTGGGAAACATTTCTCCGAATATGCTGCACGCTTCTATGCTGCAGAGGTTCTACTGGCTATTGAATATCTTCACATGCTTGGGGTTGTGTATAGAGACCTCAAACCTGAAAATGTGTTGGTTCGGGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTCAGATGCACCGTTTCGCCTACTCTTATCAGAAGTTCCTATAGTGGCGACCCTTCAAAACGACTTGGCAGTGGTGGATTCTGTGTCCAGCCGGCTTGTATTGAGCCATCATCAGTATGCATCACACCTGCATGCTTTATGCCTCGATTCTTTCCGAAGAAAAACAAGAAGTCATGTAAGCCTAAAGAGGATCCTCGGATGCTGTCCAGCGCATTTCCAGAGCTTGTTGCAGAGCCTACTGCAGCTCGATCAATGTCCTTCGTCGGTACACACGAATACCTTGCCCCGGAAATTATCAAAGGAGAAGGTCATGGCAGTGCAGTTGACTGGTGGACATTTGGAATTTTCTTGCACGAGCTTTTATACGGTAAAACACCATTCAAAGGGTCCGGAAATCGCGCTACGCTTTTCAATGTAGTTGGCCAGCAGCTAAAGTTTCCCGAATCACCATCAACCAGTTACGCAAGCCGAGACCTGATACGGGGATTGCTAGTGAAGGAGCCACAGCATCGCCTCGGGGTTAAGAGGGGCGCAACTGAGATCAAGCAACACCCTTTCTTTGAAGGTATCAACTGGGCATTGATTAGGTGCAGCACACCACCCGAAGTGCCAAGACCGGTCGAAAACGAGCTACAAGGAAAGTTAGGACCAGTCGATACTGTTCCTGTAGGAAGCACTAGTAAGAGGGTAATAGGTGGTAAATATTTGGACTTTGAGTTCTTTTAG 2208 0.4638 MERVAEPKGVPLTSPIRFEVSNSKMVASREMSQRLHRQEEASRGRDVPTARLLSDAARMILIRDDIGFDSRASQEMSEGKASLVESEELMADVETSNGSSDSFEDGGSGSFAGASHPPEPVDTDLMKTVYIPLGQKDTQLMRTVYVPICQNKPEAGCLMNSFSMKGPFQEDLSIGIPTKKPSPNVLSSEDSLTEELSDTGNLSTPFSGARASQNTENSLLPPDSEEKEIVWDASLPPSGNVSPLSSIDSTSVVKAMSMVNSNASTYRSDAFTSDGMLSLEKMSIRGDSLESAKTSGSRVSDSSGLSDDSHWSNITGSANKPHKGNDPRWKSILAIRSRDGILGMSHFKLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLIRSSYSGDPSKRLGSGGFCVQPACIEPSSVCITPACFMPRFFPKKNKKSCKPKEDPRMLSSAFPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGINWALIRCSTPPEVPRPVENELQGKLGPVDTVPVGSTSKRVIGGKYLDFEFF* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2072 735 MobiDBLite consensus disorder prediction 288 325 - -
Lan1g2072 735 MobiDBLite consensus disorder prediction 288 320 - -
Lan1g2072 735 MobiDBLite consensus disorder prediction 30 46 - -
Lan1g2072 735 ProSiteProfiles Protein kinase domain profile. 347 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g2072 735 PANTHER FLIPPASE KINASE 1-RELATED 136 735 - -
Lan1g2072 735 PANTHER FLIPPASE KINASE 1-RELATED 62 136 - -
Lan1g2072 735 Gene3D Phosphorylase Kinase; domain 1 345 430 - -
Lan1g2072 735 SUPERFAMILY Protein kinase-like (PK-like) 327 703 IPR011009 -
Lan1g2072 735 Gene3D Transferase(Phosphotransferase) domain 1 577 698 - -
Lan1g2072 735 Gene3D Transferase(Phosphotransferase) domain 1 431 498 - -
Lan1g2072 735 SMART serkin_6 347 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g2072 735 MobiDBLite consensus disorder prediction 91 120 - -
Lan1g2072 735 CDD STKc_phototropin_like 345 700 - -
Lan1g2072 735 MobiDBLite consensus disorder prediction 23 48 - -
Lan1g2072 735 MobiDBLite consensus disorder prediction 179 222 - -
Lan1g2072 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lan1g2072 735 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 136 735 - -
Lan1g2072 735 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 62 136 - -
Lan1g2072 735 MobiDBLite consensus disorder prediction 180 220 - -
Lan1g2072 735 MobiDBLite consensus disorder prediction 92 106 - -
Lan1g2072 735 Pfam Protein kinase domain 578 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g2072 735 Pfam Protein kinase domain 348 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2072 Lan-Chr1 35927193 35929998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2072 1 735 AGC Kinase Gene Family AT2G44830 63.038 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan1g2072 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2072 - - gmx:100792314 1087.79