Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2069 ATGGATGAATATGGAACCCCAATCACTCTCTCTAAACTACCCAACATCTCTGAAGACCAACCCTATGACCAAAACACCCTCTTTTTCAACGGTGGTGGATCACTTGCTTGGCCGTATCCCCACCATATACCACCACCATACTCCTCCACCGGCCACCATGACCACAACCTTGACCTTGTGCCAGCACATAAGAAGCCTCGAGGAAGACCACATGGTTCAAAAAACAAGCCAAAACCAACCACTGTGAGCACAAAAGAGAGTGATGATTTCATGAAACTAGTGTCCATTGAAGTCTCTATTGGCTGTGATGTAGTTGAAGCTATAGTGAAATTTGCTCACCTACACAATGTTGGTATCTCAGTGCTTAGTGGGTCAGGTTCAATTTCTAATGTAACCCTTCATAACCCTTTTCCTCATTCTCCTTATTTTACCCTAAATGGTTCTTTCACTTTGGTTTCTCTAAGTGGAACCTATATATCTAATCTTTCTAATCCTTACACTCTTATGGCTACACCATCTTCTGCATCAATCCCTAATCATCCTTTTTCAGATGCTGCTAGTTCTTTTGGGATTTCAGTTTTAGGGTCTCAGGGTGAGATTCTTGGTGGGGTTGTTGCTGGAAAAGTTGTGGCTGAATCTACTGTCACAGTCATAGCCACTGTGTTCAAGAAACCAGAATTTCATAGGGTTGGATTCAATGTGAATGGTGAAGTTAATGCAAGTGGAAATGATAGCATGATGATGATGAGTAATTTTCTGAATCCACAAGCCCCTTATGCTCCACATGTCCCTTATGCTAATGTCAATATGTTCCAATAA 819 0.4176 MDEYGTPITLSKLPNISEDQPYDQNTLFFNGGGSLAWPYPHHIPPPYSSTGHHDHNLDLVPAHKKPRGRPHGSKNKPKPTTVSTKESDDFMKLVSIEVSIGCDVVEAIVKFAHLHNVGISVLSGSGSISNVTLHNPFPHSPYFTLNGSFTLVSLSGTYISNLSNPYTLMATPSSASIPNHPFSDAASSFGISVLGSQGEILGGVVAGKVVAESTVTVIATVFKKPEFHRVGFNVNGEVNASGNDSMMMMSNFLNPQAPYAPHVPYANVNMFQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2069 272 CDD DUF296 96 222 IPR005175 -
Lan1g2069 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 230 - -
Lan1g2069 272 MobiDBLite consensus disorder prediction 46 86 - -
Lan1g2069 272 ProSiteProfiles PPC domain profile profile. 88 246 IPR005175 -
Lan1g2069 272 Gene3D - 91 241 - -
Lan1g2069 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 57 234 IPR014476 GO:0003680
Lan1g2069 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 223 IPR005175 -
Lan1g2069 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 57 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2069 Lan-Chr1 35904787 35905611 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2069 54 230 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.782 3.82e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2069 - - lang:109361806 254.603