Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2064 ATGGATCCAACCTTATCTCCAACTTCCCCAACAAACACCTCCCCACCTTTTGCTGTCCCTCTCCTGCCTGCCCCACCCCTCCCGCCTCCCTCCACCTCCCGACGTCTCCCTCCTCCCTGCTGGACCCCCGAAGAAACCTCTGCCCTCATCGACTCCTACCGCCATAAATGGTACTCCCTCGGCCGAAGCAATCTCAAGGCCACCCACTGGCAGGAGGTTGCTGACGCTGTCTCCGCCGCATGCCCCAATGTCTCACCGCCCAAGACTGCTGTTCAGTGCCGCCATAAGATGGAGAAGCTTCGGAAGCGTTATCGGGCTGAGATCCAGCGTGCTAGGAACCTTCCTGTCAAGAAATTTAACTCTTCGTGGGTCCATTTTAAGCTTATGGATTCCATGGAGAAAGGTCCGAATAATAATAACGATGATGGTGATGATAACAAGGATGATAGTAATAATAATAATAATGCTGATTTTGTTGATGTTGATGAGAATGATGGTGAGGATGATGAGGATCAGGATTTGATCCACGCGAATTCGCTGTATAAATTGCGTAGGAATGGAATTGATAGTGGTGGTAGAGGTGAAGGAGGGTTTCGGATTCGGATTCCTAGTGGAGTTAGTGTAGCGAAACCTGATTCGAGGTTTTATCCGAGATTTAGTGATGAGAGAAGGAACCCTAGTTCTGGGTATGGGGGAAAGGGTGTGAAAGAGGGAAGTGTGTTGGGGAAGAGAGAGAGGGAGAGGGAGAAAGAGAGGGATCCGGTGGAGGAAATGGTGAACGCGATTAAGGTTTTGGCAGATGGGTTCATGAGGACAGAGCAGATGAAGATGGAGATGGCGAAAGAGATCGAAAGTATGAGGATGGAAATGGAGATGAAGCGAACCGAGATGATTTTAGAGTCACAGCACAGGATTGTCGAGGCTTTCGCTAATGCTGTCTCTGAGCAGAAGAAGAAAAATAAAAGGGTACCATCATCACCCGAATCATAG 990 0.4919 MDPTLSPTSPTNTSPPFAVPLLPAPPLPPPSTSRRLPPPCWTPEETSALIDSYRHKWYSLGRSNLKATHWQEVADAVSAACPNVSPPKTAVQCRHKMEKLRKRYRAEIQRARNLPVKKFNSSWVHFKLMDSMEKGPNNNNDDGDDNKDDSNNNNNADFVDVDENDGEDDEDQDLIHANSLYKLRRNGIDSGGRGEGGFRIRIPSGVSVAKPDSRFYPRFSDERRNPSSGYGGKGVKEGSVLGKREREREKERDPVEEMVNAIKVLADGFMRTEQMKMEMAKEIESMRMEMEMKRTEMILESQHRIVEAFANAVSEQKKKNKRVPSSPES* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2064 329 MobiDBLite consensus disorder prediction 137 151 - -
Lan1g2064 329 SMART 118neu2 48 137 IPR006578 -
Lan1g2064 329 MobiDBLite consensus disorder prediction 238 254 - -
Lan1g2064 329 PANTHER TRANSCRIPTION FACTOR 5 326 - -
Lan1g2064 329 MobiDBLite consensus disorder prediction 131 172 - -
Lan1g2064 329 MobiDBLite consensus disorder prediction 211 254 - -
Lan1g2064 329 Pfam Myb/SANT-like DNA-binding domain 39 132 IPR044822 -
Lan1g2064 329 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 326 IPR044823 -
Lan1g2064 329 Coils Coil 94 114 - -
Lan1g2064 329 Gene3D - 41 106 - -
Lan1g2064 329 ProSiteProfiles Myb-like domain profile. 41 101 IPR001005 -
Lan1g2064 329 MobiDBLite consensus disorder prediction 1 39 - -
Lan1g2064 329 MobiDBLite consensus disorder prediction 9 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2064 Lan-Chr1 35840062 35841775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2064 3 132 Trihelix Transcription Factor Family AT3G14180 32.143 2.67e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan1g2064 Myb_DNA-bind_4 2.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2064 - - mnt:21391418 322.783