Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2063 ATGTCCTTCAATCAATCCAAATCCGATAAGAACGAATCTCTTTATCGGAAATCTTCGAGATCCACTAGCTTCAATCAGCAACGTGGTTCATCTGCCTCTTATGTCAAAGCCGCTGCTGCTGGTGGCGCCGCCGCCGCCTCACTTTCATCTAACCGGAGTTTTAACAAGAAGCCTAATAATGCACAAGGTGGGCAATCTAGGGTGAACTCTACCCCGGTGAATTCAACAGAGGCTAATAGTGCTCCTACTGCCGCGACCGTACAGAATGGTACCCACGTACAACCACAACTACATGGAGGGGCACCTGATGCGCCACTTACAACCAAGCCATCTGAATCATCAGCTGCACAGAGGAGCAGTAGAGTTGTTCCAAAAGCCCCAGCTTCTCAACCGCCACCCCCCATTAGTTCTGATTCAGCCAACCCTACAACCCCTTCCAAGGGAGATGCATCCAAGGCATTCCCTTTCCAATTTGGATCCATTAGTCCTGGTTTTATGAATGGGATAGCAATTCCAGCCCGCACTAGTTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCATCACGACTCTTTTAGATCTGTGCCTTCAGGGCCGACACCTCCTGTTCCGAAGCAGCAGCAGCCACCTAGGAAAGACGCAGGTGTCACCCACCAATCTAATGCTAGGGAGATTCATACAGGATCTAAAGGAAGGAAGGATCCTCCGGGATCAGCTTCGACCCCAGCAGGCCTGATTCAGAAGCCTTCTGTTGTTTCTGTAGCTGGGATTTCAACGCCAATGCCATATCATCAGTCACAGGCACCTTTACAGTTTGGTGGTCCTAATCCACATATTCAATCTCAGGGTTTGTCAACAGCACCCCTTCAGATGCCTTTACCGATACCTATACCAATTGGAAATCCTGCCCAAGTGCAACAACCAGTTTTTGTTCCTGGTCTTCAATCTCATCCAATGCATCATCAGGGGATAATGCATCCAGGCCAAAACCTGACTTTTACTCCTCCAATGGTTCATCAGCTGTCCCATCAATTAGGAGGCATGGGTATTGGCCCCCAATACCCTCAGCAGCAAGGAGGAAAATTTGCCACTCCTCGAAAAACTACCCCTGTGAAGATTACTCATCCTGATACACATGAAGAGCTGAGGCTTGATAAAAAAACAGATGTTTATTCAGATGGTGGGGCATCTGGCATTAGATTACATCCTAAAACCCCTTCTCTGTCTCAGCCCGTTCAACCTTCTGCAGCTTCTCATCCTTTGAAATATTATTCAAATTCCTTTAATACAAGTTCTCACTATCATCCACCTCCTAGTTCTCTTTCACCAACAAGTAGCCATATAACTCCTACTTCTCAATCACCGAGATTTAATTATCCCGTGAATCATGGTCCGCAAAATGCGAGTTTCATGAGTTCAGCATCACTTGGTTCTCCACCTGTTAATAAAGCTAGCACTCCTATCATTGGCATGTTTGAAGCACATAATTCGGAAAGTTCCCATGATGGGCCTAATACTCCGTCATCAGCTCCATCTGGAGTAACTTCTGTCACTATTAAGCCAAGTGGTTCATCTGCTTTGGTGGACTCATCATTACCCAATTCCAGTATTTCTGGTGTTCAAGATAGAGAATCTAGTTCCACAGCATCTTCTGATACTAGCTCCTTTGTGCCACAAAAAGAGTCTAAAACATTTACAGAGAACTCTTCACACCAGTCTAAATTGTCCAGTAACTCTTCAGTTCCGGGTTCACTGCCAAAACAATCTTCTGCATCTGTTGCTGTATCTGCTGAGAAGCCTACAGTCATTCCCTCGGCGCTTCCTTCACCAACAGCTAGTGGCGATTCTGTCTCGGTTGTGTCTAATAATGAACGCCAATTGAAAGAATCTCTTAGTAGGTCTATCTCTCTTACGAATAATCATAATAAACCATTGAACAAAGGTCAATTACAGCATCAGGTTTCTGTTAAATCTCCTATAGAGGCTAATGTCTCTTCTCGAGCTGTTGGCAGTGGTGTATCTGATACTGGAATTTCCGAACCTGCAGGAACTAAAACAAAGTATTCTGTGGCAGTTAATGCTGAAGCTCTTCCATCATCTCCTGACACAATATCAGCTACCAGCAGTAGCGTTCCTAGAGCTGATGAAGTGAAGACCAACTCTTCTGCCGATGTTTCCGCTCTTTCAGTTGAAGAAACTGGGGTGCAAGTTGCTGATAATTTGAACAATCATAAGAATGATAAACTTCATGACTCAGCAGAAGTTAAACATTTAAAGCATGATATTTTGGAAATTTCAAATAAAACTGATAAGTCGTCTCTCGAAGATTACAAACAAAACATTATCTGTGATGGTACAGAATTTCAACAGTCTGAACAAGATGCTGCAATGGTAAGCACGGAGCTGATAACCTCGAAGACTGTACAGCACCAACAGGATGAATCTGCAAGTTCCAGTGCAGAATTTGAAAGCACAGATCTGCAGTCTGCTGATCTTCCAGAAACAACTTCAATACGTGTGAAGGATAGTTCAGAGAATGCTGACAGTGAGTCACTGTCTCTTCCAATGTCAGGTAACAAGGATAGACAAACTTCAGATGCAAATAAGGCAAAAGTTACATCTAAAGGAAAGAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCCGGGTCAATTTCTGATCTCTACAATGCATACACGGGACCTGAGGAAAAGAAAGAAGCTGTCCTGAGTTCAGAGAGCGCAGAAAATGATTCTACTTCTGGAAATTCGAAGCAGCTGAGTGCTGAACCTGCTCAACCTGGTGCTGTAGCAAGCAAGAAATCTGGAGAGACTAAAGCTGAACCCGATGACTGGGAGGATGTTGTGGACATGTCTACACCAAAACTTGAAGTTGCTGATAAGTCAAAACAGGTTAGCGATGAAAGTGGAGGTACAGCCAAAAAGTATTCTCGGGATTTCCTTTTGAAATTCTCTGAGCAATGCACTGATCTTCCTGAAGGTTTTGAAATCTCAGCAGACGTTGCTGCATCTTTGATGAGCGCTAGTAGTAGTAGTGGTCATTTTATTGAGCGTGATTCACATCCTAGTCCCGGAAGAAACGTAGCTAGGATGGATCGCCGTGGAAGTGGTATGAATGAGGAAGACAAATGGAATAAAGTTTCTGGTGCTTTTCATTCTGGACGTGGACAAGGGGTAAATAATTTTGGTGTTTTAAGGAATCCTCGTTCCCCGGCTGGAGGGATCCTTTCTGGGCCAATGCAATCCATGGGAAATCAAGGTGGAACGCAAAGAAATAGTGCTGATGGTGAAAGGTGGCAACGTTCTGCTAGCTTCCAGCATAGGGGTTTAATTCCTTCACCTTCAACTCCTCAAACTCCTTTACAAATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAACATCAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAAGCTATCTTAAACAAACTAACCCCTCAGAATTTTGAGAGACTTTTTGAACAAGTAAAAGCAGTTAATATTGATAATGCAGTCACCCTCACTGGTGTCATCTCACAGATCTTTGAGAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTCACATCTGGCTTCTGCGTTGCCTGATTTCAGTGAGGACAATGAAAAGATTACATTTAAGAGATTATTATTAAACAAATGCCAAGAGGAATTTGAGAGGGGTGAAAAAGAACAAGAAGATGCCAATAAGGCCGACGAGGGAGAGGTCAAACAATCTGATGAAGAAAGGGAAGAGAGAAGAGTCAAGGCTAGAAGACGTATGTTAGGTAACATCAGATTGATTGGAGAACTATATAAGAAAAGGATGTTGACGGAGAGGATAATGCACGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAGGAAGATATTGAATCATTGTGCAAACTGATGAGTACTATCGGTGAGATGATTGACCATCCCAAAGCCAAGGTGCATATGGATGCGTATTTTGATAGAATGAAGGTATTTTCAAATAATATGAATTTATCATCTAGGGTGAGGTTCATGTTGAAGGATGCGATCGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCGAAGAAGATTGAGGAGGTACACAGAGATGCTGTGCAAGAGAGGCAAGCTCAAGCTCAAGGTGGTAGGATGGGTCGGGGTCCGGGCAACAATCCATCAGCAAGAAGGAGCCCCATGGATTTTGGTCCAAGAGGATCATCAATGTTGTCTTCTCCTACTGCTCAGATGGGTGGACTGCGTGGGCAGCCTACTCAAGTTCGGGGGTATGGTTCTCAGGATGCTCGTTTTGAGGAAAGGCAATCTTATGAGGCTAGGACCTTGTCAGTTCCTTTGCCTCAAAGAGCCTTAGCCGACAGTTCTATAACCTTGGGACCTCAAGGTGGTCTTGCTAGGGGAATGTCAATTAGAGGATCAGCAGTAATTTCGAGTTCATCAATTTCGGATGGATTTCCTGTCCCTGGAGACTCTCATAGAATGATTGGTGGTCCTAATAGTTCTGGTCCAGTTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATATAAACTATGGTAACAGAGACTTGAGGAATGTAGATCGGAATCTCGACAGACCTATTTTAACTTTGCCTACTGCTCAATTGCAACGTTCAACAGTCTCCCAGAATGTTCCTTCAGAGAAGATATGGCCAGAAGAGCGACTACAGGACATGTCCATGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGATAAGGAAGTTGCATTATGCATCAAAGAGTTGAACTCTCCAAGCTTTCACCCTTCTATGGTTTCTCTTTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAAAGAGATCTTTTGGCTAAACTACTAATCCACCTTGTGAAATCTCAGGATGGCACATTGAGCCAAGCCAATCTCATCAAAGGGTTCGAATCTGTTCTCAGTACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCGGAGTTTCTTGGCCGAATTTTCGCCAAAGCTGTAACAGAGAGCGTAGCCACCTTGAATGAGATCGGGCGGCTTATACATGTCGGTGGAGAGGAGCCAGGGAGTCTCTTGGAAGCTGGGCTTGCAGGTGATGTTCTGGGATGGACCTTAGAGTCTATACAATCAGAGAAAGGGGAAGCTGTTTTAAGTGAGTTTCGTTCAAGCTCTAACTTGGTGTTGGAAACTTTTAGGTCACCTAATAAATCAATTACATCAAGGAAGTTAGAGAAATTTATTTAG 5346 0.4396 MSFNQSKSDKNESLYRKSSRSTSFNQQRGSSASYVKAAAAGGAAAASLSSNRSFNKKPNNAQGGQSRVNSTPVNSTEANSAPTAATVQNGTHVQPQLHGGAPDAPLTTKPSESSAAQRSSRVVPKAPASQPPPPISSDSANPTTPSKGDASKAFPFQFGSISPGFMNGIAIPARTSSAPPNIDEQKRDQAHHDSFRSVPSGPTPPVPKQQQPPRKDAGVTHQSNAREIHTGSKGRKDPPGSASTPAGLIQKPSVVSVAGISTPMPYHQSQAPLQFGGPNPHIQSQGLSTAPLQMPLPIPIPIGNPAQVQQPVFVPGLQSHPMHHQGIMHPGQNLTFTPPMVHQLSHQLGGMGIGPQYPQQQGGKFATPRKTTPVKITHPDTHEELRLDKKTDVYSDGGASGIRLHPKTPSLSQPVQPSAASHPLKYYSNSFNTSSHYHPPPSSLSPTSSHITPTSQSPRFNYPVNHGPQNASFMSSASLGSPPVNKASTPIIGMFEAHNSESSHDGPNTPSSAPSGVTSVTIKPSGSSALVDSSLPNSSISGVQDRESSSTASSDTSSFVPQKESKTFTENSSHQSKLSSNSSVPGSLPKQSSASVAVSAEKPTVIPSALPSPTASGDSVSVVSNNERQLKESLSRSISLTNNHNKPLNKGQLQHQVSVKSPIEANVSSRAVGSGVSDTGISEPAGTKTKYSVAVNAEALPSSPDTISATSSSVPRADEVKTNSSADVSALSVEETGVQVADNLNNHKNDKLHDSAEVKHLKHDILEISNKTDKSSLEDYKQNIICDGTEFQQSEQDAAMVSTELITSKTVQHQQDESASSSAEFESTDLQSADLPETTSIRVKDSSENADSESLSLPMSGNKDRQTSDANKAKVTSKGKKKRKEILQKADAAGSISDLYNAYTGPEEKKEAVLSSESAENDSTSGNSKQLSAEPAQPGAVASKKSGETKAEPDDWEDVVDMSTPKLEVADKSKQVSDESGGTAKKYSRDFLLKFSEQCTDLPEGFEISADVAASLMSASSSSGHFIERDSHPSPGRNVARMDRRGSGMNEEDKWNKVSGAFHSGRGQGVNNFGVLRNPRSPAGGILSGPMQSMGNQGGTQRNSADGERWQRSASFQHRGLIPSPSTPQTPLQMMHKAEKKYEVGKTSDEEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLASALPDFSEDNEKITFKRLLLNKCQEEFERGEKEQEDANKADEGEVKQSDEEREERRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIESLCKLMSTIGEMIDHPKAKVHMDAYFDRMKVFSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAVQERQAQAQGGRMGRGPGNNPSARRSPMDFGPRGSSMLSSPTAQMGGLRGQPTQVRGYGSQDARFEERQSYEARTLSVPLPQRALADSSITLGPQGGLARGMSIRGSAVISSSSISDGFPVPGDSHRMIGGPNSSGPVAYDQSSAPERNINYGNRDLRNVDRNLDRPILTLPTAQLQRSTVSQNVPSEKIWPEERLQDMSMSAIREYYSARDDKEVALCIKELNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLIHLVKSQDGTLSQANLIKGFESVLSTLEDAVNDAPRAAEFLGRIFAKAVTESVATLNEIGRLIHVGGEEPGSLLEAGLAGDVLGWTLESIQSEKGEAVLSEFRSSSNLVLETFRSPNKSITSRKLEKFI* 1782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1246 1274 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 809 843 - -
Lan1g2063 1781 Gene3D - 1587 1781 - -
Lan1g2063 1781 Gene3D - 1155 1390 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 609 628 - -
Lan1g2063 1781 SUPERFAMILY ARM repeat 1147 1379 IPR016024 -
Lan1g2063 1781 Coils Coil 1237 1257 - -
Lan1g2063 1781 Pfam MIF4G domain 1155 1377 IPR003890 GO:0003723|GO:0005515
Lan1g2063 1781 MobiDBLite consensus disorder prediction 850 866 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 917 934 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 501 599 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 107 124 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 17 33 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 406 468 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 359 468 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1430 1455 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 46 95 - -
Lan1g2063 1781 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 126 1770 IPR045208 GO:0003743
Lan1g2063 1781 MobiDBLite consensus disorder prediction 809 983 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1400 1461 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 498 628 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 947 983 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 375 393 - -
Lan1g2063 1781 SMART ma3_7 1593 1707 IPR003891 -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1030 1053 - -
Lan1g2063 1781 Pfam MA3 domain 1598 1703 IPR003891 -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1024 1053 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1 250 - -
Lan1g2063 1781 ProSiteProfiles MI domain profile. 1592 1716 IPR003891 -
Lan1g2063 1781 SMART if4_15 1155 1377 IPR003890 GO:0003723|GO:0005515
Lan1g2063 1781 MobiDBLite consensus disorder prediction 1093 1112 - -
Lan1g2063 1781 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 126 1770 - -
Lan1g2063 1781 MobiDBLite consensus disorder prediction 702 728 - -
Lan1g2063 1781 SUPERFAMILY ARM repeat 1588 1770 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2063 Lan-Chr1 35811222 35820280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2063 1 1780 Eukaryotic Initiation Factors Gene Family AT3G60240 46.341 0.0 1296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2063 K03260 - gmx:100796636 2087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0082 12 812747 821524 Lan1g2063 1 35811222 35820280 LSH
Lan1g0924 1 19950521 19958682 Lan1g2063 1 35811222 35820280 LSH