Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2061 ATGGTGTCCATAAAATCATCCTACATTGTGATTCCAAATGAACCAACTCCAAAGGGTCTTTTGTGGCTATCCCACAATGACCAAACAGTGCGTTGGGATCATACCTCTTCTATCTACATTTACAAGGAACAACCCAACCTTGATGCCATTGAAATATTGAAGGACTCACTCTCTAAGATTTTAGTCTCATACTATCCTATAGCTGGTAGATTGAGATATGCAGAAAATGGTAAATTGGAATTAGATTGTAATACAAAGGGAGTGGAATTGGTTGAAGCTGAAAACACAAAAACATTGGCTCAATATGGTGATTTTTCACCTAATGAAACTTTCAAAGAACTTATTCCTAAGGTTGATTATACTCAACCAATAGAGGACATTCCCTTAATGTTGGTGCAACTAACAAGGTTTTATGGCATTGATCAAGGTGTTGCCATTGGAGTTTCTTTTTCTCATCCTTTGACCGATGGGTTTGGCGCTATTCGCTTCATTAACTCATGGGCCAAGCTAGCTAGGGGAGAAACTTTAGAGGCTTCTGAATTGTTTCCAGTACTGGATCGTTCAATACTAAAATCCCCGCATCCACCATCAGCACCACGTTTCGATCATGCTGAGTTCAAGCCTTTGCCTCTCATGCTAGGGAGTTCTGATCACTTAGCTGAGCAAGGGAAAAAGCTTAGTGTGGTAACATTGAAACTCACATTAGAGCAAGTTGAGGGGCTGAAGAAGAAAGCAAATGATGAATCTCAGAAAGAAGGGTCAAGACCTTATAGTAGATATGAAGCTATTGCAGCATATATTTGGAGATGTGCATCTAGGGCTCGTGAACTTGATCATCTTCAACCAACTCAACTTCGATTCGTTGTCGATTTTCGTAACAGATTGAATCCACCTCTTCCTAAGAATTACTTTGGAAATGCTTTTACTCCAACAGTGACACCAACATGCTATATTGGAGACATTATATCAAAGCCATTAAGCTATGTTGCCCAGAAAATAAGAGAAGCAACTGAGCTTATAAAAAGTGATTATATATGGTCACAACATGATTTTATTAAGTGTCATGAGAAACTTAATGAGTTAAGACCCTCCTTTCAATTTCAAGAGAAGCATAAGAAAAACTCTCCATTTTTTGGAAACCCTAACCTTAATGTTGTGAGTTGGATGCATATGCAATGGCTTGAAGCAGATTTTGGTTGGGGGAAACCTATGTATTTTGGTCCAGCACTTGTGTGCACAAGTGACAAAGCATACCTCATTAGAAGTTCTAATGATTCCATCATCATATCTATGCATTTTCAAGTAGCACACATGCCACTTTTTATCAAGTTCTTTTGGGAGGATATTTAA 1350 0.3844 MVSIKSSYIVIPNEPTPKGLLWLSHNDQTVRWDHTSSIYIYKEQPNLDAIEILKDSLSKILVSYYPIAGRLRYAENGKLELDCNTKGVELVEAENTKTLAQYGDFSPNETFKELIPKVDYTQPIEDIPLMLVQLTRFYGIDQGVAIGVSFSHPLTDGFGAIRFINSWAKLARGETLEASELFPVLDRSILKSPHPPSAPRFDHAEFKPLPLMLGSSDHLAEQGKKLSVVTLKLTLEQVEGLKKKANDESQKEGSRPYSRYEAIAAYIWRCASRARELDHLQPTQLRFVVDFRNRLNPPLPKNYFGNAFTPTVTPTCYIGDIISKPLSYVAQKIREATELIKSDYIWSQHDFIKCHEKLNELRPSFQFQEKHKKNSPFFGNPNLNVVSWMHMQWLEADFGWGKPMYFGPALVCTSDKAYLIRSSNDSIIISMHFQVAHMPLFIKFFWEDI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2061 449 Gene3D - 215 446 IPR023213 -
Lan1g2061 449 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 449 - -
Lan1g2061 449 Coils Coil 228 251 - -
Lan1g2061 449 Pfam Transferase family 1 441 - -
Lan1g2061 449 Gene3D - 1 208 IPR023213 -
Lan1g2061 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2061 Lan-Chr1 35796207 35798633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2061 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.444 6.59e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2061 K13065 - gmx:100787038 540.036