Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2045 ATGGCTATGCCTCTGCTTCTTTTTCTCATCTTCTCACTAAAACTCATACCAATCTCAATTCTATGCCAAAGCATAAGTAACATAACAATTGGTGCTTCTCTATCAGCAGGAACCAACAACAACAACAATTCTTCATGGATGAGTTCACCTAATGGTGATTTTGCATTTGGCTTTATCAAACTTGAACAAGACACTAATCTTTTCTTGCTTTCAATTTGGTATGCAAAGATTCCAGACAAAACCATAGTCTGGTATGCAAACACAGACACTCCTGCATCAAATGGTTCAATACTTGAACTCACTTCCAATGGCCTAGTCCTCACTGCTTCAAATGGTGAGCAGATATGGAAAACAGAAGGCCTAAATGCCCGAGTTTCGCGCGCCATGTTAAACGATTCGGGCAATTTCGTGCTAATGGACGATAATTTCGCGAATGTATGGGAGACTTTTCACAATCCTAGAGATACCTTGCTTCCTACTCAAGTTATGCAAAAGGGTGGAAAACTTTCTTCTAGACTTAAGGAGAATGATTTCAAGAAGGGAAAGTTTGAGTTTTTTCTTCAAGATGATGGTAATCTTGTAATGTATTCTGTGAACTTACCCTCTGGATATGTTAATGATAACTATTATACAAGTGGAACTGTTAATTCTAGTGCATCAAGTGCTGGAACTAAATTGGTTTTTGATATGTATGGAGACATGTATATTTTGAGAGAGAATAATGAAAAGCATAATCTTTCAGAAGAGGGTAGAGTCTCTACTACACAGTATTATCTTAGAGCAAGTCTCAATTTTGATGGAGTATTCACACTTTATCAACATCCAAAGAATTCCAATAGCAGTGATGGTTGGAGCACAGTGTGGTCTATCCCAGATAATATTTGCACCTATGGTGTTCTTAATCAAGGTAGTGGTGTTTGTGGATACAATAGCATCTGCACCTTGAAAAATGATAAGAGACCAAGTTGTGAGTGCCCAAAATGGTATTCACTTATTGATCCTAATGATCCATATGGTAGTTGCAAACCAGATTTTGTACAAGGATGTTCAGAAGATGAACTTAGTAACAACAAAAAAGATCTCTATGATTTTGAAGTGTTGATAGATACTGATTGGCCTTATTCTGATTATGTGCTTCAAAAGCCTTTTACTGAAGAAAATTGCAAGCAATCTTGTATGGAAGATTGCATGTGTTCTGTTGCTATTTTCAGGCTAGGTGATAGCTGCTGGAAGAAGAAAATGCCACTTTCAAATGGTCGGGTTGATTCGGGACTTAACGGCTCGAAGGCGTTCATGAAAGTGAGGAAAGATAGTTCCTTTTTGCTTCCTCCTCCAACCATTGTGATCAAGAAAAGGAAAACTTTGATTTTGGTTGGCTCTGTCCTTTTTGGAAGTTCTGCTTTTCTCAATCTTGTATTGATTGGACTAATCTGGTTGAGCACTTGTTATGTTTTTGTGTACAAGAAGAAGCTTAGAAGAGTTAACCAAAGGGATTATGCAGTTAAAACCAATTTGCGCTGTTTCGCATATGAGGAACTCAAAGAAGCTACCAACGGGTTCGATAAAGAGTTAGGAAGGGGAGGTTTTGGTGTTGTATATGAAGGAGTTATAAACATAGGTTCCACGACTCGTGTCGCGGTTAAAAAGTTGAACAATTTTCTCTTGCAAGAGGTTGAGAAAGAATTCAAGAATGAACTGAATGTCATTGGTCTAACTCATCACAAGAACTTGGTTCGCGTGATCGGATTTTGTGAAGCTGAATCGGAACGGCTGCTGGTTTTCGAGTACATGAGCAATGGGACTTTGGCAAGTCTGCTTTTCAATGGAGAGAAACCAAGTTGGAAACTAAGGCTACAAATTGCATTTGGCATTGCTAGAGGTCTTTTATATTTACATGAAGAGTGTAGCACTCAGATCATCCACTGTGACATCAAGCCTCAGAACATACTCCTTGATGATTATCATAATGCTCGAATTTCCGATTTTGGGTTATCGAAGCTTTTGAATATGAACCAAAGCAAAACCAATACTGTCATAAGGGGAACAAAAGGGTATGTTGCACCTGAATGGTTTAAAAACATGCCTATCACTTCAAAAGTGGATGTATATAGTTTTGGTGTGCTTCTACTTGAGATTATTTCTTGTAGAAGAAATGTGGAACTTGAGACAGAAAATGAAGAGAAAGAAATTCTGACTGATTGGGCTTATGACTGTTATAAAGATGGTAATTTGGATGCATTAGTTGAGAATGATAAAGAAGCATTGGAGGATAAGAAGAACTTTGTGAAGTTAGTAATAATTGGAATTTGGTGTGTTCAAGAAGATCCAAGTCTTAGACCAAGCATAAAAAAAGTCACACAAATGCTTGAAGGTGTTGTTGAAGTTCAAGTTCCACCATGCCCTTCACCAATTAGTATTCAATACTCTCTAGACTAA 2436 0.3773 MAMPLLLFLIFSLKLIPISILCQSISNITIGASLSAGTNNNNNSSWMSSPNGDFAFGFIKLEQDTNLFLLSIWYAKIPDKTIVWYANTDTPASNGSILELTSNGLVLTASNGEQIWKTEGLNARVSRAMLNDSGNFVLMDDNFANVWETFHNPRDTLLPTQVMQKGGKLSSRLKENDFKKGKFEFFLQDDGNLVMYSVNLPSGYVNDNYYTSGTVNSSASSAGTKLVFDMYGDMYILRENNEKHNLSEEGRVSTTQYYLRASLNFDGVFTLYQHPKNSNSSDGWSTVWSIPDNICTYGVLNQGSGVCGYNSICTLKNDKRPSCECPKWYSLIDPNDPYGSCKPDFVQGCSEDELSNNKKDLYDFEVLIDTDWPYSDYVLQKPFTEENCKQSCMEDCMCSVAIFRLGDSCWKKKMPLSNGRVDSGLNGSKAFMKVRKDSSFLLPPPTIVIKKRKTLILVGSVLFGSSAFLNLVLIGLIWLSTCYVFVYKKKLRRVNQRDYAVKTNLRCFAYEELKEATNGFDKELGRGGFGVVYEGVINIGSTTRVAVKKLNNFLLQEVEKEFKNELNVIGLTHHKNLVRVIGFCEAESERLLVFEYMSNGTLASLLFNGEKPSWKLRLQIAFGIARGLLYLHEECSTQIIHCDIKPQNILLDDYHNARISDFGLSKLLNMNQSKTNTVIRGTKGYVAPEWFKNMPITSKVDVYSFGVLLLEIISCRRNVELETENEEKEILTDWAYDCYKDGNLDALVENDKEALEDKKNFVKLVIIGIWCVQEDPSLRPSIKKVTQMLEGVVEVQVPPCPSPISIQYSLD* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2045 811 CDD STKc_IRAK 524 791 - -
Lan1g2045 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 215 IPR036426 -
Lan1g2045 811 SMART blect_4 38 153 IPR001480 -
Lan1g2045 811 Gene3D Phosphorylase Kinase; domain 1 490 596 - -
Lan1g2045 811 PIRSF SRK 1 810 IPR024171 GO:0004674
Lan1g2045 811 Pfam Protein kinase domain 521 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g2045 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Lan1g2045 811 Gene3D - 28 155 - -
Lan1g2045 811 Gene3D - 156 298 - -
Lan1g2045 811 ProSiteProfiles Protein kinase domain profile. 518 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g2045 811 CDD B_lectin 54 153 IPR001480 -
Lan1g2045 811 SMART serkin_6 518 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g2045 811 ProSitePatterns Protein kinases ATP-binding region signature. 524 549 IPR017441 GO:0005524
Lan1g2045 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 806 - -
Lan1g2045 811 SUPERFAMILY Protein kinase-like (PK-like) 502 790 IPR011009 -
Lan1g2045 811 ProSiteProfiles Bulb-type lectin domain profile. 31 151 IPR001480 -
Lan1g2045 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 7 806 - -
Lan1g2045 811 Gene3D Transferase(Phosphotransferase) domain 1 597 802 - -
Lan1g2045 811 Pfam D-mannose binding lectin 81 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2045 Lan-Chr1 35560275 35563901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2045 504 801 Receptor kinase-like Gene Family AT1G60800 39.432 4.13e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan1g2045 Pkinase 6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2045 - - gmx:100815462 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0948 11 9708954 9711757 Lan1g2045 1 35560275 35563901 LSH