Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2028 ATGAAAATGGATCCACACCATGAAAGATTTAGTGGTAATGAAATTCAGTTTGGGAATCAATCTTTGCCACTTTTGCATAATCAAGGATTTTCTACTATACCCAGATTTCAAAATTCATCCTTTTTTGATCAAAGTAGAGATTTTGATTATCTTCAATTTGATCCAATACAAGCTAATACATCTTCATCCTCTACTGTGACTCATGAGGAACAATCTCCAGAGGATTGTGATTTTTCTGATGCAGTTTTGAGTTACATTAGTCAGATCCTTATGGAAGAAGATATGGAAGACAAGACATGCATGCTTCAAGATTCTTTAGATCTTCAATCAGCTGAGAGATCATTTTATGATGTTCTTGGTGAAAAGTACCCACCTAACAATCAAAATGATGGTGTTGGAGGTAACTTGCCTCTGCAAAATCTTCAAGGTAATAGTGTTTCAAACTCACCTTACAGCTCTTGTAATAGTGTAATAAGTAGTACTTTGGACTCTTCAAGTAGTAATCTTCAGGTCCCTGATTTGAGTAGTGAGAATCAATCCATTTGGCAATTTCATAAGGGTGTTGAGGAAGCTAATAAGTTTCTCCCAAGTGGAAATGATCTCTTTGCGAATTTTAAACCACTAGAGCCAAAAGTAGGAATTGATGAGTGGTCTGTTAAGGTGGAGAAGGATGAGGGTGAAGATGTTGTTGATGGATACAAGGGAAGGAGGTATCCTGAGAGGGATGAGGAAGATGTTGAAGAAAATAGAAGCCGAAAGCAAGCAGCAATTTATTCGGAACCAACATTACGGTCAAGTATGATAGATATAATCCTGCTTCATAGTGCAGGAGATGGTAAGGATCATTATGTTGCACGTCGCGATGCATTGCAGAATAAAACAAACAAGATATTGATGGCTAGTGGTCAATCAAAACAATCCAATGGTGGTAAGGGACAGAGAAAGAAACAAAGTAGGAAAAATAAAGTGATCGATTTGCGAACATTACTGGTTCTTTGTGCACAAGCTGTTGCAGCAGATGACTATAGGAATGCACATGAGTTGTTAAAGCAGATTAGGCAGCACTCGAGCCCTTTTGGGGATGGGAATCAGAGGTTGGCTCATATTTTTGCCGATGGACTTGAGGCACGCTTGGCTGGTACTGGAAGTGAAATTTATAAGGGACTTGTTAGTAAAAGAACACCAGCTGCTGATATTCTAAAAGCTTATCATCTATACCTTGCTGCATGCCCTTTTAGCAAAATTTCTAATTTTACGTCGAATGTCACAATAAGGGAATCTGCAGCAAATTCAATGAGGGTTCACGTTATAGATTTCGGCATCTTTTATGGTTTTCAGTGGCCCACTTTTATACAGAGGCTTTCATGGAGAGCAGGAGGACCACCAAAGCTTCGGATTACGGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCAGACAGAGTTATAGAAACAGGACGCCGCTTGACAGCTTATGCCGAATCCTTTAATGTACCATTTGAGTATAATGCCATAGCAAAGAAATGGGAAACAATTCAACTTGAGGAACTGAGGATCGATCGGGATGAGTTCCTTGTTGTTACTTGTTTTTATAGAGGTAAGAACTTACTGGATGAATCTGTAGTAGTGGACAGTCCTAGGAAAAATTTCCTCAGTTTGATAAGGAAGATCAACCCAAACATATTCATCCATGGCACTATGAATGGGGCCTTCAATGCCCCTTTCTTTGTTACCCGATTCCGGGAGGCACTGTTTCACTATTCAGCACTGTTCGATATGCTAGAAACCATTGTGCCTCGCGAAGATTGGGAGAGGATGCTAATTGAGAAGGAGATATTTGGGAGAGAAGCATTGAATGTTATAGCTTGTGAAGGCTGTGAAAGAGTAGAGAGGCCAGAGACATATAAGCAGTGGCAAGCACATATTCTCCGGGCTGGGTTTTCGCAACAGCCGTTTGATCGCGAGACGGTAAAGATGGCAATGGAGAAAGTAAGATCTAGCTACCATAAGGATTTTGTAATTTATGAAGATAGTAATTGGTTGTTGCAAGGTTGGAAAGGCCGAATCATCTATGCGCTTTCTTGCTGGAGACCTGCATGA 2100 0.4033 MKMDPHHERFSGNEIQFGNQSLPLLHNQGFSTIPRFQNSSFFDQSRDFDYLQFDPIQANTSSSSTVTHEEQSPEDCDFSDAVLSYISQILMEEDMEDKTCMLQDSLDLQSAERSFYDVLGEKYPPNNQNDGVGGNLPLQNLQGNSVSNSPYSSCNSVISSTLDSSSSNLQVPDLSSENQSIWQFHKGVEEANKFLPSGNDLFANFKPLEPKVGIDEWSVKVEKDEGEDVVDGYKGRRYPERDEEDVEENRSRKQAAIYSEPTLRSSMIDIILLHSAGDGKDHYVARRDALQNKTNKILMASGQSKQSNGGKGQRKKQSRKNKVIDLRTLLVLCAQAVAADDYRNAHELLKQIRQHSSPFGDGNQRLAHIFADGLEARLAGTGSEIYKGLVSKRTPAADILKAYHLYLAACPFSKISNFTSNVTIRESAANSMRVHVIDFGIFYGFQWPTFIQRLSWRAGGPPKLRITGIDFPQPGFRPADRVIETGRRLTAYAESFNVPFEYNAIAKKWETIQLEELRIDRDEFLVVTCFYRGKNLLDESVVVDSPRKNFLSLIRKINPNIFIHGTMNGAFNAPFFVTRFREALFHYSALFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQAHILRAGFSQQPFDRETVKMAMEKVRSSYHKDFVIYEDSNWLLQGWKGRIIYALSCWRPA* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2028 699 Pfam GRAS domain family 326 697 IPR005202 -
Lan1g2028 699 ProSiteProfiles GRAS family profile. 317 697 IPR005202 -
Lan1g2028 699 MobiDBLite consensus disorder prediction 128 154 - -
Lan1g2028 699 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 698 IPR005202 -
Lan1g2028 699 MobiDBLite consensus disorder prediction 122 154 - -
Lan1g2028 699 MobiDBLite consensus disorder prediction 231 253 - -
Lan1g2028 699 MobiDBLite consensus disorder prediction 298 320 - -
Lan1g2028 699 PANTHER SCARECROW-LIKE PROTEIN 9 46 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2028 Lan-Chr1 35423805 35428041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2028 74 698 GRAS Transcription Factor Family AT2G37650 54.286 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan1g2028 GRAS 2.2e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2028 - - gmx:100780785 1041.18