Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2027 ATGTCCGATAAAACAAAGCAGCGTCGTTTAACGTTCTCGCTTCCCGTAACCGTTGTCGTTTTGGCCATCTCCTACATTTACCTCTCTACTATCTTCGTTTTCATTGACCAATGGTTCGGTCTCTTCTCCTCACCAGGGATCATAAACGCCGTCGTTTTTACCTCCGTCGCCGCCATGTGCTCCGTCACATACCGTGTCGCTATTTCCGCCGATCCAGGTCGGGTTCCTTCCACGTACATGCCTGATGTTGAAGATTCCCAAAGCCCTATTCATGAGATCAAGCGTAAGGGTGGAGATTTGCGATATTGCCAAAAGTGTTCTCACTATAAGCCTCCCCGTGCTCATCATTGCCGGGTTTGTAAAAGATGTGTTCTACGAATGGATCACCATTGCATTTGGATAAATAACTGCGTTGGCCATGCAAACTATAAGGTCTTCATCATTTTTGTCATGTATGCTGTAATTGCTTGCGTGTACTCCCTGGTTCTACTCATGGGCAGTGTAGCTTATGATGATGGTATGCAGGATGAAGAGAAAAATGGTGGCTCTTTCAGAACTGTATATGTTATTTCTGGGCTTTTGCTTGTCCCCTTATCTATAGCATTATGTGTGCTTCTAGGATGGCATATCTATCTCATCCTACATAACAAGACGACAATAGAGTATCATGAAGGAGTGAGAGCTTTGTCGCTTGCAGAGAAAGGTGGTACTATCTATAAGCATCCGTATGACCTTGGCCCATATGAGAATTTGACATCTGTTTTAGGGCCAAACATCCTTAGCTGGCTGTGGCCAACAACAGACCATATAGGTTCTGGACTTAGGTTCCGCACGGTCTACGATATCACACAAGGTGCATCGACATCTAAATAA 873 0.4479 MSDKTKQRRLTFSLPVTVVVLAISYIYLSTIFVFIDQWFGLFSSPGIINAVVFTSVAAMCSVTYRVAISADPGRVPSTYMPDVEDSQSPIHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWINNCVGHANYKVFIIFVMYAVIACVYSLVLLMGSVAYDDGMQDEEKNGGSFRTVYVISGLLLVPLSIALCVLLGWHIYLILHNKTTIEYHEGVRALSLAEKGGTIYKHPYDLGPYENLTSVLGPNILSWLWPTTDHIGSGLRFRTVYDITQGASTSK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2027 290 ProSiteProfiles DHHC domain profile. 101 151 - -
Lan1g2027 290 PANTHER S-ACYLTRANSFERASE 9 282 - -
Lan1g2027 290 Pfam DHHC palmitoyltransferase 99 223 IPR001594 GO:0016409
Lan1g2027 290 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2027 Lan-Chr1 35418744 35422770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2027 63 265 Lipid Metabolism Gene Families AT4G22750 35.484 4.28e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2027 K20029 - gmx:100798478 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0949 11 9718835 9725395 Lan1g2027 1 35418744 35422770 LSH
Lan1g0756 1 17639953 17645385 Lan1g2027 1 35418744 35422770 LSH