Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2019 ATGACAAAACTCAACCTCACTTTACTAGTCACTTTCATTTCTCTTTTCTTTACAAGTATCCTAGTTAAACCTTCTTTTGCCAACCATAATTCTCAAACAATGTCCTACATAGAATCCTCATGCAATGGTACCCTCTACCAAGATTTATGCATTCGTTGTCTTTCCAAATATATAACAAATTATTCTACTATAGATGGTCCTCAACACTTAGCACATGTTGCTTTATCAGTGAGTCTCTCTAGGGCACTACACACAAGAGGGTACATGTTGAAAATTTCAGAGGAACTCATTACAATGAAGAAAGATAAGGAGTACCTAACAGTGCAAGATTGTGTGAATCAAATCAATGATAGTGTTGATCAACTTAGCCAAGCCATCAAAGAACTACGTAGGTTTAACCAACTTGGCTCCACCATAAATGATAACATGTTGTGGCACATAAGTAATGTTGAGACATGGGTAAGCACTGCTTTAACAGATGCTAGTAGTTGTGTGTATTCTTTTAGTGGTCATAGAATGAGTAAGAGAATGGCTAGTATCAAGGTTAAGGCACAAAATGTTGCTGAAGTCACTAGTAATGCATTAGCTTTGTTTCATAGATATGCAACTAGAACCTCCAAAAAGCCTTAA 630 0.3635 MTKLNLTLLVTFISLFFTSILVKPSFANHNSQTMSYIESSCNGTLYQDLCIRCLSKYITNYSTIDGPQHLAHVALSVSLSRALHTRGYMLKISEELITMKKDKEYLTVQDCVNQINDSVDQLSQAIKELRRFNQLGSTINDNMLWHISNVETWVSTALTDASSCVYSFSGHRMSKRMASIKVKAQNVAEVTSNALALFHRYATRTSKKP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2019 209 PANTHER BNAANNG18590D PROTEIN 3 204 - -
Lan1g2019 209 SMART PMEI_2 32 197 IPR006501 GO:0004857
Lan1g2019 209 Pfam Plant invertase/pectin methylesterase inhibitor 36 197 IPR006501 GO:0004857
Lan1g2019 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 201 IPR035513 -
Lan1g2019 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 200 IPR035513 -
Lan1g2019 209 CDD PMEI-like_3 39 203 - -
Lan1g2019 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 204 - -
Lan1g2019 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2019 Lan-Chr1 35336834 35337518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2019 5 198 Carbohydrate Esterase AT1G11580 27.638 4.31e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2019 - - gmx:100791798 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0146 12 1751427 1752206 Lan1g2019 1 35336834 35337518 LSH