Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2017 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGGGTGTTTGATTTTTGTTCTGGTGCTACTTCAGATTCATTTTCATTGCTTTTGCGCCAACAACAACAAGAACAAAAGTGGAGCATAGAAAAAGAGGATTATTGCTATGTGGGAACTGAACCCACTTCTGTTCTTGAATCCAGAAGAAGCCCCAATCCTTCTTTATCCTCTTCCACAATGTCCTCTTCCCTTGGCAGTAACAACACTGTTGCAGCCACAACCCTCTCAGAGAATCTACCTCATACATCTTTGGAAACAAGCACAGAAAAATGTGGTATGAGGGTGGAGGATTGGGAGGGTCAAGATCAGTGTATTATGAGATTAATCATGGGTGATGTTGAAGACCCTTCTGCAGGATTGAGCAAGCTCTTCCAAACCGATGGTTTCGGGTCTCAAAATGTTGATTTCAATGGAGGTTTTGGTGTTGTGGACCAAGGGTTGAATATGGTAAGTGTTGTTGACCCTTATGTGCAAGGAAATTACCTTGGCTTCCCATTCATTGAGAATATAGATGGTCACAATGCGAAGACTGGTTCTTCGTCTGTCTCGGAATCAATTTTGGTTTCTGCTAACAATCCTTTGTTGGTTTTGTCACCCCCTGGTGTGTTTAATTCTCAGCAGCATCAGCCGGTGGTTGGTGTAGCAGATGAGAAGCCGCAACTGATCAATCCTCGGTTGATGTTTAACCAGAGTCAAGTTCCATTCTCAGAGAACCCTTCTTTGTTTATGCCATTGACATACCCTCAAATGCGAGAGCAGGAAGCTTTCTCTCAGCATAAAGCGAAACGGCCTTTGTCTGACACTGTCGGGCACGACACTTACCAGGTTCCGAGGTTACCCCGTTTCGACTTTGGGCAAGAGCTACTTGCTAGGAGGCAGCAAACACAGCATCCGTTCTTTCCTCATCAGCATCTGCAACAGCAGCTACAATCATTGGTTGTGCCATCTGCAAAACAGGAGAAGGTGAATTCCACTGGAGATGATGCAAGCAACCAGCTTCAGCAGAGTATATTTGACCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTACTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAGTTGGTAAGCCTTTCCAGAGGGCTACTTTTTACATGAAGGAGGCCTTGCAGTTACTGCTCAACTCGAACATTAGCAATTTTTTTGCTTTCTCGCCCATCAGTTTCATATTCAAAATTGGAGCTTACAAGTCATTTTCTGAGATATCACCGTTTCTTCATTTTGTTAACTTCACTTGTAATCAAGCGCTCATCGAAGCTATGGAAAGGTTTGATCGAATCCATGTTATTGATTTTGACATCGGGTTTGGAGAGCAATGGTCATCTTTTATGCAAGAGCTTGCCTTAAGAAATAATGGTGCAACTTCGCTTAAAGTTACTGCTATTGTAACTCCCTCCACTTGCGATGATGTTGAGCTCAATTTTATCCGAGAAAATTTGAACCAATATGCCAAAGACATTAACATGTCGTTTGAGCTCAATGTTCTGAGCATTGAATCACTGAACTCTCCTTGTCCTCTGGCTGGTCAATTCTTTGATAATGAGGCAATTGCTGTGAATTTGCCACTTTCTTCTTTCACAAATTACCCGTCATTGGTTCCTTCAGTCCTTCGCTTTGTAAAGCAGCTTAGGCCAAAAGTGGTGGTCACTTTGGATAGAAATTGTGACCGAATCGATGTACCATTTTCCACCAATGTACTCCATGCTCTTCAATGTTACTCAGCCTTGCTTGAGTCACTCGATGTAGTCAATGTGAGCCCAGATGTACTCCAAACTATTGAGCGGCATTTCGTCCAACCAGCCATTAAGAAAATTGTATTGGGCCACCACCACTCACAGGAAAAGCTACCTCCTTGGAAGAACCTGTTTCTTCAAACTGGGTTTTCTCCATTCACATTTAGTAACTTCACAGAAGCTCAAGCAGAATGTTTAGTGCAGAAGGCGCCGGTGCGAGGATTTCAAGTGGAGAGAAGGAACTCATCTCTTGTTCTATGCTGGCAGCGGAAAGAACTTATCTCAGTTTCGACTTGGAGATGTTGA 2127 0.4382 MKAMPLPFEEFQGKGVFDFCSGATSDSFSLLLRQQQQEQKWSIEKEDYCYVGTEPTSVLESRRSPNPSLSSSTMSSSLGSNNTVAATTLSENLPHTSLETSTEKCGMRVEDWEGQDQCIMRLIMGDVEDPSAGLSKLFQTDGFGSQNVDFNGGFGVVDQGLNMVSVVDPYVQGNYLGFPFIENIDGHNAKTGSSSVSESILVSANNPLLVLSPPGVFNSQQHQPVVGVADEKPQLINPRLMFNQSQVPFSENPSLFMPLTYPQMREQEAFSQHKAKRPLSDTVGHDTYQVPRLPRFDFGQELLARRQQTQHPFFPHQHLQQQLQSLVVPSAKQEKVNSTGDDASNQLQQSIFDQLYKTAELIEAGNPVLAQGILARLNHQLSPVGKPFQRATFYMKEALQLLLNSNISNFFAFSPISFIFKIGAYKSFSEISPFLHFVNFTCNQALIEAMERFDRIHVIDFDIGFGEQWSSFMQELALRNNGATSLKVTAIVTPSTCDDVELNFIRENLNQYAKDINMSFELNVLSIESLNSPCPLAGQFFDNEAIAVNLPLSSFTNYPSLVPSVLRFVKQLRPKVVVTLDRNCDRIDVPFSTNVLHALQCYSALLESLDVVNVSPDVLQTIERHFVQPAIKKIVLGHHHSQEKLPPWKNLFLQTGFSPFTFSNFTEAQAECLVQKAPVRGFQVERRNSSLVLCWQRKELISVSTWRC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2017 708 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 707 IPR005202 -
Lan1g2017 708 MobiDBLite consensus disorder prediction 57 80 - -
Lan1g2017 708 Pfam GRAS domain family 353 707 IPR005202 -
Lan1g2017 708 ProSiteProfiles GRAS family profile. 342 707 IPR005202 -
Lan1g2017 708 MobiDBLite consensus disorder prediction 55 80 - -
Lan1g2017 708 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2017 Lan-Chr1 35311764 35314993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2017 351 708 GRAS Transcription Factor Family AT4G00150 53.867 3.43e-123 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan1g2017 GRAS 1.9e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2017 - - gmx:100801785 966.452