Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2010 ATGGATATGATGATGGCAAATAAAATAGAGGGACAGTTGATGGGTTCAGAGATACATGGATTCTACACATTGAAAGAGCTAGATGTGGGGAGCATTATGGTTGAAGCAAGAACGAGATGGCTTCGTCCCAATGAGATTCATGCCATTCTTTGTAATTACAAGTATTTTACCATCTATGTCAAGCCAGTGAATTTGCCGAACAGTGGTACGGTTGTATTATTTGACCGCAAGAAGCTTAGGAACTTTCGAAAAGATGGACATAACTGGAAAAAGAAAAAAGATGGGAAAACTATTAAAGAAGCTCATGAACACTTAAAGGTTGGTAATGAAGAAAGGATCCACGTATATTATGCACATGGCCAAGATAACACAGACTTTGTTCGTAGATGTTATTGGCTGCTTGATAAGAGTGTGGAACACATAGTGCTTGTTCATTACCGTGAAACACAGGAGGTGCAAGCTTCTCCTGTCTCTCATGTGAATTCAAACTCTAGTTCTTCTGATCCAGCCGCACTATTAATTACATCAGAAGAAATAGATTCGAGGACCAACATTGCATATGCTGGTGAGATTAATCACAATTCAGCAGTCAAAAGTCATGAACTGAGGCTTCTCGAGATAAATACACTGGAATGGGATGACCTAGTTCTTGCAAATGATCTTAATTCCTCTACTGTGCCTAATGAAGGCACAGTTCAAGATTTTGATCAACAAAATCAAGTTTTGTTGAATAACAGTTTCAACAATGGTTTTTGTCAGCCAGTAGCCAGCAATCGATCTGCTGAGATTCCTTCTTTTGATTATTTAACTCAGCCAATTGCTGTGAGCGATAGTGTTCCGTACAATTTTTCAGAAAGTGTTAATCTTCAGACAGTGCACAATCAAGTAAATCCAATTGAGCACAGGAACCATCCCGTCTCTGCAAGTAACAATTTAGTCAATGACAAATTGCAAAGTCAGAACAGCACTGGAATGTGGGTGAACATCATTTCTGATTCACCATGTTCAGTAGATGAATCAGCTCTTGAATCCTCAGTTTCATCTGTTCACGAATCTTATTCATCTCCGGTAGTCGATAATCAGCAATCTTCTCTGCCTGAACAAGTATTTAATCTCACTGATTTGTCCCCTACTTGGGTGTCTTCAACTGAGAAATCAAAGGTCCTGGTGACTGGATTCTTTCATAAGGACTATCAACACCTTTCCAAGTCCAATCTATTGTGTGTTTGCGGTGATGTAAGTGTGGCTGTAGAAACTGTTCAGGTTGGGGTCTATAGATGCTGGCTATCACCACATTCTCCTGGATTTGTGAATCTCTATTTGAGCTTTGATGGCCATAAGCCCATTAGCCAAGTTGTTAATTTTGAGTATCGTACTACTGTTTTGCATGATCCTGCAGTTTCTATGGAACAGAATGACAACTGGGATGAATTTCTACTTCAAACGAGGCTTGCTCATTTGCTCTTTGCTAAACAAAAGAGCCTTGATGTTTTCTCTAGTAGTGTATCACCTAATGCACTAAAGGAGGCTAGACAATTCGCCTTGAAAGCGTCATACATTTCAAATAATTGGCAATACTTGATCAAGTCAACTGAAGACAAGAAAATTCCATTTTTGCAAGCAAAAGAAGCCCTACTTGGGACTGCATTGAAAAACAGACTAAAGGACTGGCTTTTGGAAAGAATTGTTTTAGGTTGTAGGACTACTGAGTTCGATGCACAAGGCCAAAGTGTAATCCATTTGTGTGCAATTTTGGAATATACTTGGGCTGTTTCCTTATTTTTGTGGTCAGGATTATCGCTAGATTTCCGGGATAAATTTGGATGGACAGCTCTTCATTGGGCGGCTTATTATGGAAGGGAGAAAATGGTTGCAACTCTGTTGTCTGCTGGGGCAAAGCCAAATTTGGTCACGGATCCAACTCCCCAAAATCCTGGTGGGTGCACTGCTGCTGATATTGCTTATATGAAGGGTTATGATGGCTTAGCAGGTTATCTTTCAGAAAAGTCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGGAATATTAGAGGCTCACTGAAAAGTAGCACGACTGAACCAGTAGGATCTGACAACCTTACCGAGGAGCAGTTGTACCTGAACGATACGTTGGCAGCGTACCGAACAGCTGCCGAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCCCTAAAATTGCAAATGGAGGCAGTTGAATTTTGCAGTCCAGAGGCTGAAGCGCGTGTAATAGTTGCCGCAATGAAGATTCAGCATGCCTATCGTAACTATGAGACAAGGAAAATGATGGCAGCTGCTGTTCGCATTCAGCATACATACCGTACATGGAAGACTCGTAAGGAATTTCTCAAAATGCGTCGTCAGGCTATCAAAATCCAAGCTGCTTTTCGGCAATTTCAAGCGCGGAAGAATTATCGCCAAATTCTTTGGTCTGTTGGTGTGGTTGAGAAAGCAGTACTTCGCTGGCGTTTAAAGAGAAGAGGCTTACGTGGGCTCCAGGTTAATCCTGTGGAAGCAACCGGAGATCAGAAGCCAGAAAGTGATGTTGAGGAGGACTTCTTTCGGATTGGTAGAAAACAAGCTTCAGAGCGTGTTGAGAGATCTGTAGTGCGTGTGCAAGCCATGTTCCGTTCTAAAAAAGCACAAGAAGAGTATAGGAGGATGAAGCTGACACTTACACAAGCAAAGGAATATGAAGAACTCCTCAATAGTGAAGTTGAGATGGAATGCAAGTAG 2763 0.4162 MDMMMANKIEGQLMGSEIHGFYTLKELDVGSIMVEARTRWLRPNEIHAILCNYKYFTIYVKPVNLPNSGTVVLFDRKKLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGQDNTDFVRRCYWLLDKSVEHIVLVHYRETQEVQASPVSHVNSNSSSSDPAALLITSEEIDSRTNIAYAGEINHNSAVKSHELRLLEINTLEWDDLVLANDLNSSTVPNEGTVQDFDQQNQVLLNNSFNNGFCQPVASNRSAEIPSFDYLTQPIAVSDSVPYNFSESVNLQTVHNQVNPIEHRNHPVSASNNLVNDKLQSQNSTGMWVNIISDSPCSVDESALESSVSSVHESYSSPVVDNQQSSLPEQVFNLTDLSPTWVSSTEKSKVLVTGFFHKDYQHLSKSNLLCVCGDVSVAVETVQVGVYRCWLSPHSPGFVNLYLSFDGHKPISQVVNFEYRTTVLHDPAVSMEQNDNWDEFLLQTRLAHLLFAKQKSLDVFSSSVSPNALKEARQFALKASYISNNWQYLIKSTEDKKIPFLQAKEALLGTALKNRLKDWLLERIVLGCRTTEFDAQGQSVIHLCAILEYTWAVSLFLWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTPQNPGGCTAADIAYMKGYDGLAGYLSEKSLVEQFNDMSLAGNIRGSLKSSTTEPVGSDNLTEEQLYLNDTLAAYRTAAEAAARIQAAFREHSLKLQMEAVEFCSPEAEARVIVAAMKIQHAYRNYETRKMMAAAVRIQHTYRTWKTRKEFLKMRRQAIKIQAAFRQFQARKNYRQILWSVGVVEKAVLRWRLKRRGLRGLQVNPVEATGDQKPESDVEEDFFRIGRKQASERVERSVVRVQAMFRSKKAQEEYRRMKLTLTQAKEYEELLNSEVEMECK* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2010 920 ProSiteProfiles IQ motif profile. 755 781 IPR000048 GO:0005515
Lan1g2010 920 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Lan1g2010 920 SMART iq_5 873 895 IPR000048 GO:0005515
Lan1g2010 920 SMART iq_5 770 792 IPR000048 GO:0005515
Lan1g2010 920 SMART iq_5 793 815 IPR000048 GO:0005515
Lan1g2010 920 SUPERFAMILY Ankyrin repeat 548 669 IPR036770 -
Lan1g2010 920 ProSiteProfiles IQ motif profile. 771 800 IPR000048 GO:0005515
Lan1g2010 920 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Lan1g2010 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 821 IPR027417 -
Lan1g2010 920 Pfam CG-1 domain 35 148 IPR005559 GO:0003677
Lan1g2010 920 SMART CG_1_2 32 150 IPR005559 GO:0003677
Lan1g2010 920 Pfam Ankyrin repeats (3 copies) 557 636 IPR002110 GO:0005515
Lan1g2010 920 Gene3D - 539 676 IPR036770 -
Lan1g2010 920 Gene3D - 770 818 - -
Lan1g2010 920 ProSiteProfiles IQ motif profile. 794 818 IPR000048 GO:0005515
Lan1g2010 920 SUPERFAMILY E set domains 371 458 IPR014756 -
Lan1g2010 920 SMART ANK_2a 607 636 IPR002110 GO:0005515
Lan1g2010 920 SMART ANK_2a 646 677 IPR002110 GO:0005515
Lan1g2010 920 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
Lan1g2010 920 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 18 919 - -
Lan1g2010 920 Gene3D Immunoglobulins 366 461 IPR013783 -
Lan1g2010 920 Pfam IQ calmodulin-binding motif 796 815 IPR000048 GO:0005515
Lan1g2010 920 Pfam IQ calmodulin-binding motif 773 791 IPR000048 GO:0005515
Lan1g2010 920 ProSiteProfiles IQ motif profile. 875 903 IPR000048 GO:0005515
Lan1g2010 920 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 18 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2010 Lan-Chr1 35253187 35263137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2010 32 905 CAMTA Transcription Factor Family AT3G16940 52.955 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lan1g2010 CG-1 1.3e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2010 K21596 - gmx:100793970 1363.98