Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2000 ATGGCGGGTGGAGTTGGTTACGTACAAATTCAAACGGAGCCATCGCTCCGGCAAAGCGGTGGCCCTGAGCCGTGTCGGATATTCGAGGAATTGCCTGAAGCCACCATTGTCTCCGTCTCTCGTCCGGACGCTGCTGATATAAGCCCGTTGCTTCTTACTTACACCATTCAACTTCGTTACAAACAGTTCAAGTGGCAGCTGGTGAAGAAAGCTTCTCAAGTGTTTTATTTGCATTTTAAACTAAAGAAGCGTGCCTTTATGGAGGAAATGCAAGAGAGGCAAGAGCAGGTTAAAGAATGGCTTCAAAATATTGGAATAGGAGAACTCACACCCTCGATGCAAGATGATGAAGAAGCTGATGGTGAAGCTGTTTCTTTACATCATCAAGACGAAAGTGCAAAGGATAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCTGCCTTAGGAAGACTACAGTCAATATCCGGCAGGGCAAAGATCGCGATGCAGGGGTATCTGAACCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCGAAGTTATCTTTTTCACCCGAATATGGCTCTAAGCTGAAGGAAGAATATGTGAGGGTGATGCATCTGCCTAAAATTCCAAAGGATGATGATGGTGGTTCCAGAAGGTGTTGTATGTCCGACTGTTTTAGTTGTTGTAATGATAACTTGCAAAAGGTTTGGGCAGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTCGACGTGCAACCTTTGGACATTATTGTTTTTGATGTACTACCTCCCTCGGATGGGAAAGGGGATGGTCATCTATCACTAGCAAAGGAAATAAAAGAGCGAAATCCTTTACGGCATTCATTGAAGGTGACTTGTGGAAACCGTAGCATTGAACTTAGAGTGAAAAGTAGTCGAAAAGTTGCAGATTGGCTTGCTGCAATTAATGATGCTGGACTCAGAACTCGTGAACGATGGTGTCAACACCACCGCTATGATTCTTTTGCTCCACCAAGAGGCTTAATAGAAGATGGTAGTCAGGCACAGTGGTTTGTAGATGGACAAGCTGCATTTGAAGCCATTGCCTCTTCAATTAAGAATGCAAAATCAGAGATATTTTTTTGTGGGTGGTGGCTGTGCCCAGAATTGTATCTACAGCGTCCTTTTCAAACTAAAGCTTCATCAAGACTTGATAATCTGCTAGAAGAAAAAGCGAAGCAAGGGGTTCAGGTGTACATTCTTCTCTACAAAGAGGTAGCACTTGCTTTGAAAATCAACAGTTTTTATAGCAAGAGAAAGCTTCTTTGCATTCATGAGAATGTAAGGGTATTACGCTATCCTGACCACTTTTCTGCTGGTGTTTACCTTTGGTCACACCATGAAAAAATTGTCATTATTGATCATCAGATTTGCTTTATTGGGGGACTGGATTTGTGCTTCGGTCGTTATGACACACCCGAACATAAAGTTGGGGATTCCCCTCCTCTGATTTGGCCTGGAAAGGATTATTACAATCCGAGGGAATCTGAACCAAATTCATGGGAGGATACAATGAAAGATGAATTGGACCGTGGAAAATATCCCCGTATGCCTTGGCATGATGTTCATTGTGCGCTATGGGGACCTCCTTGTCGTGACATTGCTAGGCACTTCGTCGAGAGATGGAATTATGCCAAGAGGAACAAAGCTCCAAATCAGCAAGCAATACCATTACTCATGCCTCGGCATCATATGGTTATTCCGCACTACATGGGGAGATGCATAGATGATACAGCCATTGAGAGAGGAGATTCCTTTTCATTATCATCACAAGATATTCCTCTACTTTTGCCTCAGGAGTCTGGTGGGCTAAATATTTCTGTAAGAGAATCAAAATTGAATAGGTTAAGCTCATTTTCGCATCTCCACGACCAGTCAAATAGGGTCAGCAGCAGTCTTGCTTTCTCTTTACCGAAGGCCAAAATGGAACCTTCAGATATAGCAATGAAGGGTCTTAGTGGTGTGAACTATCATGATAAAATGTCTCTGGATAGAGTGTCTCATGTTGATATACAAAGCACAGCTACAGAATGGTGGAAAACACCAGAACATCCAGACGAATCACGACAAGTTGGTCCTCGTGCTTCCTGCCGTTGTCAGGTTATTAGGAGTGTGAGTCAATGGTCTGCTGGAACAAGAAAAAACGAAGAGAGCATCCACAATGCCTATTGCTCTCTTATTGAGAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGGGACGACATAATACGAAATCGTGTGTCAGAAGCTTTATATCGAAGGATTATACGAGCTTATGAGGATAACAAACTCTTCAGGGTTATAATTGTCATACCACTCCTGCCTGGCTTCCAGGGGGGTCTGGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAATTCTATATTACATAATCTGTTTCAACTTCTTGGTCCAAGAATACAAGATTACATCTCATTCTATGGCCTCAGGGCTTATGGTAGACTCTCTGATAATGGCCCTGTGGCAACCAACCAGGTTTATGTTCACAGTAAAATCATGATTGTTGATGATTGTACATGTTTGATTGGCTCTGCTAATATTAATGATAGGAGTTTACTTGGTTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGATGGAGAATTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAATTCTCGTTGACTCTCCGGTTGTCATTATGGTCCGAGCATTTAGGTCTCCGGGCAGGAGAGGTCAGTCGAATAATGGACCCTGTTGTTGAGTCTACTTATAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCATGATGTCTTTTCATGCGTGCCTAATGATGAAATACACACCAGATTTGCATTCAGACAAAGTGTAGCTTCTTGGAAAGAAAAAAATGGTCATACTACTATTGATTTGGGAATAGCCCCAAAAAATGTAGAATATTATCATAATGGAGGCATAAAAAAGGTAGAAGCCTTGGAGAGATTAGCATCAGTGAAGGGTCATCTAGTTTCTTTTCCTCTAGAGTTCATGAGCTTAGAAAATCTAAGACCTGCTTTTATTGAAAGTGAGTACTATGCTACTCAAGTTTTCCATTGA 3234 0.419 MAGGVGYVQIQTEPSLRQSGGPEPCRIFEELPEATIVSVSRPDAADISPLLLTYTIQLRYKQFKWQLVKKASQVFYLHFKLKKRAFMEEMQERQEQVKEWLQNIGIGELTPSMQDDEEADGEAVSLHHQDESAKDRDVPSSAALPIIRPALGRLQSISGRAKIAMQGYLNHFLGNISIVNSPEVCKFLEVSKLSFSPEYGSKLKEEYVRVMHLPKIPKDDDGGSRRCCMSDCFSCCNDNLQKVWAVLKPGFLALLADPFDVQPLDIIVFDVLPPSDGKGDGHLSLAKEIKERNPLRHSLKVTCGNRSIELRVKSSRKVADWLAAINDAGLRTRERWCQHHRYDSFAPPRGLIEDGSQAQWFVDGQAAFEAIASSIKNAKSEIFFCGWWLCPELYLQRPFQTKASSRLDNLLEEKAKQGVQVYILLYKEVALALKINSFYSKRKLLCIHENVRVLRYPDHFSAGVYLWSHHEKIVIIDHQICFIGGLDLCFGRYDTPEHKVGDSPPLIWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVERWNYAKRNKAPNQQAIPLLMPRHHMVIPHYMGRCIDDTAIERGDSFSLSSQDIPLLLPQESGGLNISVRESKLNRLSSFSHLHDQSNRVSSSLAFSLPKAKMEPSDIAMKGLSGVNYHDKMSLDRVSHVDIQSTATEWWKTPEHPDESRQVGPRASCRCQVIRSVSQWSAGTRKNEESIHNAYCSLIEKAEHFIYIENQFFISGLSGDDIIRNRVSEALYRRIIRAYEDNKLFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLFQLLGPRIQDYISFYGLRAYGRLSDNGPVATNQVYVHSKIMIVDDCTCLIGSANINDRSLLGSRDSEIGVIIEDGELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLRAGEVSRIMDPVVESTYKDIWMATAKTNTTIYHDVFSCVPNDEIHTRFAFRQSVASWKEKNGHTTIDLGIAPKNVEYYHNGGIKKVEALERLASVKGHLVSFPLEFMSLENLRPAFIESEYYATQVFH* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2000 1077 Pfam Phospholipase D Active site motif 465 492 IPR001736 GO:0003824
Lan1g2000 1077 CDD PLDc_vPLD1_2_yPLD_like_2 734 918 - -
Lan1g2000 1077 Gene3D Endonuclease Chain A 351 585 - -
Lan1g2000 1077 CDD PH_PLD 179 328 - -
Lan1g2000 1077 CDD PLDc_vPLD1_2_yPLD_like_1 358 502 - -
Lan1g2000 1077 Gene3D Endonuclease Chain A 688 934 - -
Lan1g2000 1077 SMART pld_4 874 901 IPR001736 GO:0003824
Lan1g2000 1077 SMART pld_4 465 492 IPR001736 GO:0003824
Lan1g2000 1077 Pfam PLD-like domain 747 921 IPR025202 -
Lan1g2000 1077 PANTHER PHOSPHOLIPASE D 19 1074 IPR015679 -
Lan1g2000 1077 Coils Coil 83 103 - -
Lan1g2000 1077 MobiDBLite consensus disorder prediction 120 137 - -
Lan1g2000 1077 SUPERFAMILY PH domain-like 237 333 - -
Lan1g2000 1077 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 465 492 IPR001736 GO:0003824
Lan1g2000 1077 SUPERFAMILY Phospholipase D/nuclease 711 924 - -
Lan1g2000 1077 MobiDBLite consensus disorder prediction 111 138 - -
Lan1g2000 1077 PANTHER PHOSPHOLIPASE D ZETA 2 19 1074 - -
Lan1g2000 1077 Gene3D - 234 335 IPR011993 -
Lan1g2000 1077 PIRSF PLD_euk 34 1077 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lan1g2000 1077 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 874 901 IPR001736 GO:0003824
Lan1g2000 1077 SUPERFAMILY Phospholipase D/nuclease 328 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2000 Lan-Chr1 35180248 35187057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2000 26 1077 Phospholipase D Gene Family (Wang group) AT3G05630 60.354 0.0 1291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2000 K01115 - gmx:100780514 1728.38