Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1997 ATGGCCGGAAACCAAGAGGGTAAGAAGAAGGTGGCCGTTCTCGGCGTGTCCGCGGTCCTTCTTGTGGCCATGGTGGCCTGCGTGGCCGTGGGTTTAAGCCGCGGCGACGAAGGCGGTAGTGAGGAAGAGGGAAAGGGTATTGTAAAAAATCAAAGGAACGTTGAGATGGTGTGTCAAGCAGCAGAATACAAAGAAACTTGTCACAAAAGCCTTGAAAAAGCATTAGATAAGGACACTGATTTGAAGGGACTTATCATAGCTGCTTTCAATGCAACTGCTATTGAATTGTCTAAGCAAATTCACAATAGCACTTTGTATGATGAGTTGGCCAAAGATAATATGACTAAACAGGCTATGGATGTGTGCAAGGAAGTGTTGGGTTATGCTGTTGATGATGTTCGCAAAACTGTTCATACTTTGGACAAGTTTGATCTCGGCAACCTCAATGAATATGCATATGACCTCAAGGTTTGGCTCACAGGTACTCTCACCCACCAATACACTTGCTTAGATGCATTTGAGAACACAACCACAGACGCTGGGCAAACCATGACCAAGGTGCTGAACACTTCAATGGAGTTGAGCAACAATGCCATTGATATAATCAATGGTTTGTCCCATCTATTCCAGGGTCTGAACTTGACCTCATTCACCACTAGTCTCACAACTAACACTAACAGGAGGCTTCTCTTTCTTCCCCTTGTGGATGACATTGGTGTCCCTTCATGGTTCACTGAAGGCCAAAAGCATTTCCTTCGAGTTCCTGGACTTGGAAATGTTAAGCCAAATGTAGTTGTGGCTCAAGATGGGTCTGGCCAGTTTAAAACACTCACTGAAGCTCTTGAAACTGTTCCTGCAAAGAACAAAGAGCCTTATGTGATTTATGTCAAGGCTGGTATCTACAAGGAGTATGTTACTTTGAATAAGCATCAAACCCATGTCACTATCATTGGAGATGGTCCCACAAAGACCAGGTTCACCGGCAACAAAAGCTACAAAGATGGTCTCCAAACTTACTTGACATCTACCTTCAGTGTCAACGCGGCCACTTTCACCGCGAAGGATATAGGGTTTGAGAATACAGCAGGACCAGATGGGCATCAAGCAGTGGCACTTCGAGTGACAGCAGATAAGGCAGTATTCCACAATTGTCACATGGATGGTTTCCAAGACACTCTCTACGTGCAATCACAACGTCAATTCTACCGTGACTGCCAAATCACAGGCACCATAGACTTCATCTTCGGAGATGCATTTGGTGTGTTCCAAAACTGCAAGCTAATAGTGAGAAAACCCAACAGCAACCAAAAATGCATTGTAACAGCAGGAGGTAGAAGCAAAGTAGATAGTCTTAGTGCTTTGGTTTTCCAAAGCTGCCAATTCACTGGTGAACCAGCTCTATTAGATTTACCTCAAAAGATATCATTCCTTGGAAGACCATGGAGAAATTACTCAAAAGTGGTTATCATGGATTCTGATATTGATGATATTTTCAACCCTGAAGGGTATATGCCATGGGCAGGAAGTGCATTTGAGAGCACATGTACCTATTATGAGTACCATAATAGAGGTCTTGGTGCTGATACAAGCAAGAGGGTTAACTGGCCTGGTGTTAAGGTTATTAGCCTTGTTGAAGCTTTAGATTTCTACCCAGGAACGTTCTTTGAGATTGCTAATGAAACTCAACGTGATAGTTGGATCTTCAATACTGGAGTTCCTTACAACGTTGGTCCTTTCCCAATTATGCCACTTCCAGATCTACCCATTACACAGTTTAATTAA 1782 0.4349 MAGNQEGKKKVAVLGVSAVLLVAMVACVAVGLSRGDEGGSEEEGKGIVKNQRNVEMVCQAAEYKETCHKSLEKALDKDTDLKGLIIAAFNATAIELSKQIHNSTLYDELAKDNMTKQAMDVCKEVLGYAVDDVRKTVHTLDKFDLGNLNEYAYDLKVWLTGTLTHQYTCLDAFENTTTDAGQTMTKVLNTSMELSNNAIDIINGLSHLFQGLNLTSFTTSLTTNTNRRLLFLPLVDDIGVPSWFTEGQKHFLRVPGLGNVKPNVVVAQDGSGQFKTLTEALETVPAKNKEPYVIYVKAGIYKEYVTLNKHQTHVTIIGDGPTKTRFTGNKSYKDGLQTYLTSTFSVNAATFTAKDIGFENTAGPDGHQAVALRVTADKAVFHNCHMDGFQDTLYVQSQRQFYRDCQITGTIDFIFGDAFGVFQNCKLIVRKPNSNQKCIVTAGGRSKVDSLSALVFQSCQFTGEPALLDLPQKISFLGRPWRNYSKVVIMDSDIDDIFNPEGYMPWAGSAFESTCTYYEYHNRGLGADTSKRVNWPGVKVISLVEALDFYPGTFFEIANETQRDSWIFNTGVPYNVGPFPIMPLPDLPITQFN* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1997 593 Pfam Plant invertase/pectin methylesterase inhibitor 54 201 IPR006501 GO:0004857
Lan1g1997 593 CDD PMEI-like_3 57 206 - -
Lan1g1997 593 PANTHER PECTINESTERASE 5 581 - -
Lan1g1997 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 206 IPR035513 -
Lan1g1997 593 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Lan1g1997 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 205 IPR006501 GO:0004857
Lan1g1997 593 Gene3D - 260 579 IPR012334 -
Lan1g1997 593 ProSitePatterns Pectinesterase signature 1. 288 307 IPR018040 -
Lan1g1997 593 Pfam Pectinesterase 263 555 IPR000070 GO:0030599|GO:0042545
Lan1g1997 593 PANTHER PECTINESTERASE 5 581 - -
Lan1g1997 593 SUPERFAMILY Pectin lyase-like 261 574 IPR011050 -
Lan1g1997 593 SMART PMEI_2 49 201 IPR006501 GO:0004857
Lan1g1997 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1997 Lan-Chr1 35158649 35161384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1997 8 574 Carbohydrate Esterase AT5G49180 44.308 1.16e-168 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1997 K01051 - gmx:100800194 755.362