Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1995 ATGGGGAACAAAAAGCGAAACACTCACGCTCCGCGTTCCAAACATTCTCCGGCGGCTTCTCCGGTGACGCAATCTGCCATCGGCGGAGCCGCCGATGTTCATGTGCCACCTGAATCCGACTCGTGCGTGGTGGTTTCTGATCTCGCCCTTCATAACCCTAGCAATAAGATCGAATTGACCACTAAGACTGAGGGTTCCGTTTACGCCTTAATCAAGCTTGAATGTGATAAAGCCCTAAATGCTTTTCGGCGCGGTAACCATAACAGAGCGCTTAAGATGATGAAGGATTTGTGCTCCAAACATGAGGGTTCGGTTTATGCTGGGTTCACTCAGCGTGTTCAGGGCTTTGTGTTGTACAAGGTGTCCATGATTATAAATGACCCAGCTGTGAAGCAAAGGCATCTGAGGAATGCCGTTGACTCGGCTCGGAGAGCGACTGAGCTGTCGCCGAATTCAATTGAGTTTTCGATGTTTTATGGTAACTTGCTATTGGAGGCTGCTAGTGAGGCAAAGGATTATGAGGAAGTGGTGCAGGAGTGTGAGAGGGCGCTCGCGGTTCAGAACCCTAATGATCCTGCAAAGGAGAGTTTGCAGGATGAGAGCGAGCATAAATCGTCCACTGTGGAGTCTCGGATAGCACATGTGCAGAATGAGTTGAGGCAGCTGATTCAGAAGTCTAATATAGCGTCGTTATCGACTTGGATGAAGACTTTGGGTAACGGTGAGGAGAGGTTTCGGTTGATTCCGATAAGGAGGCCCGCCGAGGATCCAATGGAGATGAGGTTGGCTCAGAATAGAAGACCAAATGAGATTAAGAAGGTGTCCAAGACGCCAGAAGAAAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGTTGTTGCAGCAGAAGTCAGATTCACTTCAATCTCCAAATGAAGCAGATAGGGACGAGAGGGCATTGGATTCATCGACAGGATCTGGTCATAGAATCAGTGATAGGCGTAAGTATGGGAATGTGAGAAAGAATGGGTCTACTAATGAAAGGAAGAATTGGGTGCACTCATATTGGAATTCAGTGAATATGGAAATGAAGGAGGAGTTGCTTAGGATTAGAATTAGTGATCTCAAGTCGCATTATGGGTCTTCAAAGGATACTTTGCCAAGAGATGTTTTATCAGAAGCTTTGTCCTATGCCGAGTTCAGTAAAACATGGAAATTCTGGCTTTGCTGCGAGTGTGATGAGAAATTTTCTAATCCGGAATCTCACAGGCAGCATGTTATGCAGGAACACATGCGTAATCTCTTGCCAAAGATGCAGAGACTTTTGCCCCAAAATGTTGACAATGAATGGATTGACATGATTTTAAATTGTTCTTGGAAGCCTCTGGATGTCTCAGCTGCAATTAGAATGCTTGACAATAAATCAAAATTCAAGGTTTCTCCATTCACCGAGGATTCATACTTCGGGCCTCATACTCAGAAACATCCTCATACTCAGAACTACAGTGATTGTTTTAGAGATGCAAGTGATTCTTACCACGAGAAGGAAAGTTTTGGTTACAGTCTATATAATGGTACAACAGAAGGCAGTGATTACTGTAAAATTCCAGGGAGTGATATTGCAGAAGTTGTTGAAGATCAAGAGTCTATAGCATACCCTTTTCCGGATAGTTGGCCGGTATCTGATGACTCTGAGCGTGCAAAACTTCTGGAGAAAATTCATGCAGTATTTGAGATGCTTATCAGGCACAAATTTCTTGCTGCTAGTCATCTTAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTTGCAGCTGGTTCTCTACTTGTGAACCGCGGTGTTGATCAAAGACCAGTGTGCATATGCTTTCTGGGAGCTTCACAGCTCAAGAAAATTCTCCAATTTCTGCAGGAGCTTTCTCATGCTTGTGGATTGGGTAGATATCCTGATAAAAGTAGTGGTCCCATGAATGATTCCCAAAATATCAGTCAACTTCCTGAGATCAAAGAGAAGATTGTTCTCAATGTGAATTCGTCATACCTTCTTCTGGATGAGTGTTTACTTCGAACACAAGTCACTTATGGTACAGCTGAGGGGGCTGTCTTGGATGATGTGACTGCCCCAGGTTCTCATGATAGGGTTAAACACAATAATGATGATTTGCTATCCTGGATATTTTCAAGTTCACCTATTGGAGATCAATTAACATCATGGATGAGGGCAAAAGAAGATAAACAGAAACAAGGAAAGGAAATTGTTGAGATGCTCGAGAAGGAGTTTTTACAGCTACAGGGCCTATGTGAAAAAAAGTTTGAGCGTATTAGTTATGAGGAAGCTCTGCAGACAGTAGAGGATCTTTGTCTTGAAGAAGGTAAAAAGAGGGAACATGGTGGTGAATTTGTTAAGCGAAGCTATGAGTCTGTTTTAAGAAAGCGAAGAGAAGAGCTCGTTGAGAACGAGAATGATGTGATATATGTAAGCAATAGGTTTGAGTTGGATGCTATCTCAAATGTTCTGCAAGAAGCTGAAGCAATGAATGTTAACCAATTTGGTTATGAGGAAACTTATGCGGGTGTGAATTCTCAATTATGTGACTTGGAATCTGGTGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCGCGAATCATAAGAAATGTTACAGACATGCAGCAAATGGAACTCAAGCTTGGGCCTATTTCTGCCTATGATTATCGAGCAATACTAATGCCTCTAGTGAAGTCGTACCTAAGGGCGGTTTTAGAAGATTTGGCTGAGAAAGACGCAACAGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGGTTGCTAAAGGGGGAAGTGAGAACACAAGACATTTGGAGAAGTCTAAAGATAAGAAGAATAAAGATCACAGGAAAACTAGAGATTTGAAGGCTGCAAGTGGTCATGGGCAGCTTTTGCTTCAAGATACAATTCCCGATTCCAATCCAGTTGCACCTGATTGTGACTTGGTCGTTACTGTGAATGGTGATGACTTGGAACAAGAGGAAGATGAATTTAGACGTAGAGTTGAGCTAGAAGAGGAGGAGAAAAAACTTGAAGAAACATTGGAATTTCAGCGAAGGATAGAAAATGAAGCCAAACAGAAGCACCTCGCTGAGCAGCAAAAGAAATCATCTGGGACCTATTTAGAGGAAGTGGTGGACAAACTTCAGGATGTCCGGTTGGAGGCAGTTGCTGATAGCCCAGATGTGCATGAACATTTAAAACCAGATACACAGGATCAGTTGGCAGCGGAGAATGGGTTCCCGAGCAATTTGGATAGTGTGCTTATCATCCCAGCAAATGGTTCTTTGGGACCAGCTAAATTTTCAGCTGATTCATCTGCCCAAAAGATTGGTCATTTGCATCAGTCAAAAGATAAACAAGATCTGCCTAATGGAGTTATTTCAGAGAATGGTCTTCAGTTGCCTGATAGGCGTCAAGGCAAAAAGCATAAACGACATAAGAATTCTTCCAGAATGGTTGATGGAAAGGTTGAACCTGTCTCATTGGAAAAGAATATTGAGAATACACACACTGACAATCATTTAAGAGAGCAAGTTAATTCCCATAACAATCAAGATGCTAACAATGTGTGGGAAAACCATGGATCAAAGGCATTGAAAGAGTTGACAATGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAAGAGCTGTACGCCAAAGTCTGGACACATATCAAGCACATGGCAAAAGGCCTTCAGTTTCTGGTTTAAGAATGTCGAAGAGAGCTTCCTCAGAAGTAGATAGTTCTGGTTTTGTACCAGAGGAAGTCCCAACCGGGGATTTGAGCGGATCTACTTTGCTTGGTACTGGGTTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATATAAGACGCTTTCGGGAGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCATGTGGGTAACCCATGTGTTGTCTGTGCATTGTATGAAATCTTTTATGCACTGGGCCTTTCATCAAAAGATCCAAGGAGAGAAGCAGTTGCACCTACCTCCCTGCGAATGGCTCTAAGCAACTTATATCCAGATAGTAACTTCTTCCAAGAGGCTCAAATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGATTGCCTTCATCGATCTTTTACTCGTAGTTCGAGTGTTTCTGATGCAGAATCTGTGGAAAGCAACTGCACAGGATCTTGGGATTGTGCAAGCAGTACTTGTATCGCACATTCACTTTTTGGAATGAACATCTTTGAACAAATGAACTGCTATCATTGTGGTCTTGAGTCCAGACATTTGAAGTATACTTCTTTCTTTCACAATATAAATGCGAATGCCCTTCGTACAATGAAGGATATGTGTGCTGAACCTGAAAGCTCCTTTGATGAGCTTTTGAATCTTGTGGAGATGAACCATCAATTAGCTTGTGATCTAGAAGTTGGTGGATGTGGCAAGCTCAATTACATCCATCATTTTCTTTCAACTTCACCCCATGTATTTATGACAGTTCTAGGTTGGCAAAATACATGTGAAAGTGCTGATGATATAAAAGCTACACTGGCAGCCTTGACCACCGAGATAGATATCAGTGTCCTTTATCGTGGTTTAGATCCTAAAAGGACCCATGGCTTGGTTTCTGTGGTTTGCTACTATGGCCAACATTACCATTGCTTTGCTTATAGCCATGACCATCAACAATGGATAATGTATGACGACAAGACTGTCAAGATAATTGGTGGATGGGCAGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTATGAAGCCGTAAACTAG 4965 0.4226 MGNKKRNTHAPRSKHSPAASPVTQSAIGGAADVHVPPESDSCVVVSDLALHNPSNKIELTTKTEGSVYALIKLECDKALNAFRRGNHNRALKMMKDLCSKHEGSVYAGFTQRVQGFVLYKVSMIINDPAVKQRHLRNAVDSARRATELSPNSIEFSMFYGNLLLEAASEAKDYEEVVQECERALAVQNPNDPAKESLQDESEHKSSTVESRIAHVQNELRQLIQKSNIASLSTWMKTLGNGEERFRLIPIRRPAEDPMEMRLAQNRRPNEIKKVSKTPEERRKEIEVRVAAARLLQQKSDSLQSPNEADRDERALDSSTGSGHRISDRRKYGNVRKNGSTNERKNWVHSYWNSVNMEMKEELLRIRISDLKSHYGSSKDTLPRDVLSEALSYAEFSKTWKFWLCCECDEKFSNPESHRQHVMQEHMRNLLPKMQRLLPQNVDNEWIDMILNCSWKPLDVSAAIRMLDNKSKFKVSPFTEDSYFGPHTQKHPHTQNYSDCFRDASDSYHEKESFGYSLYNGTTEGSDYCKIPGSDIAEVVEDQESIAYPFPDSWPVSDDSERAKLLEKIHAVFEMLIRHKFLAASHLNKVIQFTMGEIQGLAAGSLLVNRGVDQRPVCICFLGASQLKKILQFLQELSHACGLGRYPDKSSGPMNDSQNISQLPEIKEKIVLNVNSSYLLLDECLLRTQVTYGTAEGAVLDDVTAPGSHDRVKHNNDDLLSWIFSSSPIGDQLTSWMRAKEDKQKQGKEIVEMLEKEFLQLQGLCEKKFERISYEEALQTVEDLCLEEGKKREHGGEFVKRSYESVLRKRREELVENENDVIYVSNRFELDAISNVLQEAEAMNVNQFGYEETYAGVNSQLCDLESGEDEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNVTDMQQMELKLGPISAYDYRAILMPLVKSYLRAVLEDLAEKDATEKSDAAREAFLAELALDSKKVAKGGSENTRHLEKSKDKKNKDHRKTRDLKAASGHGQLLLQDTIPDSNPVAPDCDLVVTVNGDDLEQEEDEFRRRVELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGTYLEEVVDKLQDVRLEAVADSPDVHEHLKPDTQDQLAAENGFPSNLDSVLIIPANGSLGPAKFSADSSAQKIGHLHQSKDKQDLPNGVISENGLQLPDRRQGKKHKRHKNSSRMVDGKVEPVSLEKNIENTHTDNHLREQVNSHNNQDANNVWENHGSKALKELTMEDEEEERFQADLKRAVRQSLDTYQAHGKRPSVSGLRMSKRASSEVDSSGFVPEEVPTGDLSGSTLLGTGLKNEVGEYNCFLNVIIQSLWHIRRFREEFLGRSRSEHDHVGNPCVVCALYEIFYALGLSSKDPRREAVAPTSLRMALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTRSSSVSDAESVESNCTGSWDCASSTCIAHSLFGMNIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKDMCAEPESSFDELLNLVEMNHQLACDLEVGGCGKLNYIHHFLSTSPHVFMTVLGWQNTCESADDIKATLAALTTEIDISVLYRGLDPKRTHGLVSVVCYYGQHYHCFAYSHDHQQWIMYDDKTVKIIGGWADVLTMCERGHLQPQVLFYEAVN* 1655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1995 1654 MobiDBLite consensus disorder prediction 1 25 - -
Lan1g1995 1654 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1654 - -
Lan1g1995 1654 Pfam Protein of unknown function (DUF627) 77 187 IPR006866 -
Lan1g1995 1654 MobiDBLite consensus disorder prediction 262 283 - -
Lan1g1995 1654 Coils Coil 1034 1074 - -
Lan1g1995 1654 Coils Coil 163 183 - -
Lan1g1995 1654 MobiDBLite consensus disorder prediction 187 206 - -
Lan1g1995 1654 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1319 1653 IPR028889 -
Lan1g1995 1654 MobiDBLite consensus disorder prediction 974 1019 - -
Lan1g1995 1654 Pfam Ubiquitin carboxyl-terminal hydrolase 1320 1650 IPR001394 GO:0004843|GO:0016579
Lan1g1995 1654 Gene3D Cysteine proteinases 1312 1652 - -
Lan1g1995 1654 Gene3D Tetratricopeptide repeat domain 71 210 IPR011990 GO:0005515
Lan1g1995 1654 MobiDBLite consensus disorder prediction 1147 1199 - -
Lan1g1995 1654 ProSitePatterns Zinc finger C2H2 type domain signature. 404 425 IPR013087 -
Lan1g1995 1654 SUPERFAMILY Cysteine proteinases 1319 1651 IPR038765 -
Lan1g1995 1654 Pfam Protein of unknown function (DUF629) 347 884 IPR006865 -
Lan1g1995 1654 MobiDBLite consensus disorder prediction 296 339 - -
Lan1g1995 1654 Coils Coil 205 225 - -
Lan1g1995 1654 MobiDBLite consensus disorder prediction 304 337 - -
Lan1g1995 1654 CDD Peptidase_C19 1410 1651 - -
Lan1g1995 1654 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1995 Lan-Chr1 35124561 35134285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1995 69 1651 C2H2 Transcription Factor Family AT3G47890 56.468 0.0 1698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0868 12 15755107 15765418 Lan1g1995 1 35124561 35134285 LSH
Lan1g1383 1 23556378 23565831 Lan1g1995 1 35124561 35134285 LSH