Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1977 ATGTCGAATAAGAGGGGCCCTGAAGATGCAAAGTCCAAATCCGAATCTGGTGCTAGTTCTGATGATAAGCGTAGAAAACCTCCAGCATTTTCCAGGAATTTGCTGGAGCCAATTTTGGAGCCCTTGGTTCGTCGAGTGGTTAGGGAGGAAGTTGAATTGGCCCTAAGGAAGCATTTAACCAGCACGAAACAGACCAGTGGAAGAGAGATCCATAATGCTGAAACAAGAAGCTTGCAGCTGCAGTTTGAAAATAGCATTTCTCTTCCCGTCTTTACCGGATCTCGAATTGAAGGAGAGGATGGTTCTAACTTGAAGGTAGATTTAGTTGATGCTCTAACAGGGAAGGTTGTTAGCTCAGGGTCTGAATCTTTAGCTAAAGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGATGAAAGTGGCCATTGGGTGCCTGAAGAGTTCAAGAGCAATATTGTTAGAGAGAGGGAAGGCAAAAAGGCCCTCCTTACAGGAGATGTAATTTTATATCTAAAAGATGGGACTGGTATGGTGGGTGAAATTTCATTTACAGATAATTCAAGTTGGACAAGGAGCCGCAGATTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTACTATAATAAGAGGAGCGAAGACAGAGTCATTTATAGTCAGGGATCATCGAGGAGAATTGTACAAGAAGCACCACCCTCCTAGTTTGTCTGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGACGGGAAAAGATCCGTACTGTGAAAGATTTTCTCACACTTCTCAACATGGATCCAGCAAAGCTACGCAATATACTGGGAACCGGCATGTCTACAAAAATGTGGGAAGTAACTATGGAACATGCTCAAAATTGTGTACTTGATTCGACGAGGCACCTGTACTTCTCTCCACAGTCTCAACAGAAAACTGGTGTGGTCTTCAATGCTGTTGGACAATTGACAGGACTACTCTTTGAGTCCGAGTATATCCCTGTGGATAAGCTGTCTGAAACTGAAAAGGCTGAAGCTCAAAGCTCGGTTATTTCTGCCCTTAAACAAGGGGAGAACGTTACCTCTTTTGAAAATGAAGCCTCTCTTATGGATGGGCCTTTAAACTTAACTAATGTACTCCACTCCCCAAGATCACCTAGAACTGAGGGGTCCAGTGCTAACAAGCTTGAGGGATCCAGTGCTAACAAGCTTTTGGTTCCTGAAAAGACCGGAGTAGGATTCAATTATGAGCAAGCAAGTGCCTCTTCACCTGATATCATGTCATCCATTTATTCTGTTGATGGAATTAGTGGCTTAGATGACTATTGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCAGAGTCTTAGTTTTCCAATCCAACTCACCAACTCTTTGGTCTGTGAAACAGATTCATTGGCCCCTGCTTTCATTGAAGAAGATCATATGCAATTTTTTAATACTGATATTCACTCTCAGTGCCACATCCCAGAAGATTTACTGAGTGCTGCTGATGGCTTTATGTTGCCACGTACGTCGAATGCCATTGGTAAAGCTCGGAAGAGATGGAGAAAGGTATTCAACGTCCTAAAATGGTTCATGGTTTGGAAAGGAGTAAAATACATTTAG 1653 0.4289 MSNKRGPEDAKSKSESGASSDDKRRKPPAFSRNLLEPILEPLVRRVVREEVELALRKHLTSTKQTSGREIHNAETRSLQLQFENSISLPVFTGSRIEGEDGSNLKVDLVDALTGKVVSSGSESLAKVEIVVLEGDFEDESGHWVPEEFKSNIVREREGKKALLTGDVILYLKDGTGMVGEISFTDNSSWTRSRRFRLGARVVDNFDGTIIRGAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLRREKIRTVKDFLTLLNMDPAKLRNILGTGMSTKMWEVTMEHAQNCVLDSTRHLYFSPQSQQKTGVVFNAVGQLTGLLFESEYIPVDKLSETEKAEAQSSVISALKQGENVTSFENEASLMDGPLNLTNVLHSPRSPRTEGSSANKLEGSSANKLLVPEKTGVGFNYEQASASSPDIMSSIYSVDGISGLDDYCLPNFDSMGLRYDQSLSFPIQLTNSLVCETDSLAPAFIEEDHMQFFNTDIHSQCHIPEDLLSAADGFMLPRTSNAIGKARKRWRKVFNVLKWFMVWKGVKYI* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1977 550 Pfam Calmodulin binding protein central domain 235 301 IPR046830 -
Lan1g1977 550 PANTHER OS02G0177800 PROTEIN 1 545 IPR012416 GO:0005516
Lan1g1977 550 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 545 - -
Lan1g1977 550 Pfam Calmodulin binding protein C-terminal domain 308 369 IPR046829 -
Lan1g1977 550 Pfam Calmodulin binding protein-like N-terminal domain 78 223 IPR046831 -
Lan1g1977 550 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1977 Lan-Chr1 34963808 34968569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1977 1 360 Calmodulin-binding Proteins AT5G62570 57.880 2.79e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1977 - - ccaj:109807600 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1399 1 23740174 23744036 Lan1g1977 1 34963808 34968569 LSH