Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1956 ATGGAAATCCCAAAATCCACTTTCAAAGATAAGCGATTCTCCAAGCACAAATGGCTTTTAAAAATCGGTGCATCAATTTTGATCACAACATTGTTGTTACTAGGTTTTCATCTGGAGTCAAATTACAAAGCAGTTAATACGTCGTCGTATTATACTGTAGTTGTTGATTGTGGAAGCACTGGAACACGTGTGAATGTGTATGAGTGGATGGTTGAGGGTAAAACTGTAATTGTGACAAACAGGGATTTACCAATTTTGCTGCATTCTTATCCTGGCAATGAAACAAGGGGTTCTTCACTTTGGAAAAATTCTTGTCAATATCACTGTTTGCAAACCGAACCCGGATTAGACAAATTTGTTAATGATTCTTTCGGTGTGAGACAAAAGTTGGAGCCTTTGATTGTGTGGGCAGAAAATGTAGTACCAAATGAGAGGCATGGTGAGACTCCGGTTTTTGTTTTAGCTACTGCTGGGCTCAGGAGGCTCGCGATCCGTGATTCCGACCGAGTTTTGGATGATGTTGAGGCTGTTCTCAAAGATCACTCATTTATGTATAGGAAGAGTTGGGTTAGGGTTTTGAGTGGGAGGGAAGAAGCTTATTATGGTTGGGTTGCTTTGAATTACAAAATGGGGAGCTTTGGTAATTTTCCCAATTCTTCTCCCACTTTGGGAGTTCTTGATTTGGGTGGCTCGTCTTTGCAGATCATGGCAGAGGTTGATGATGCTGTGGATGATGTGCATGAGATGAGATCTAATATCGGTTCGGTTGAAAATCAGATTGTTGCATACTCTTTTCCCGCATTTGGCTTAAATGAAGCATTTGATAGGACTGTTCTTATGCTAAAAAACAATCAAAGCATGGAAAAAACCGGAAATAATGCTGAAGTTAGACATCCTTGTCTGATATCTACTTCTGTACAAAACTATACTGTAACCAAGAAAACTGAAGTTCATTCTTTACGTCTTATTGGAGAACCTGATTGGGAGCAATGCAAAAAAGTAGCCACTGCTGCTGCTATGAACTCAAGCAATTTCAACGTGTTACTTCCAACCATTGGCAAAAATTGCCGAGCTGGTTCATTTTCTGATATAGGCACTGGTATACTTAATTTAACAGCTATTGGACACCAAATCAAGCGCTATCATGCTTTATCTGGTTTCTTTTTTGTCTACAACAAGCTAAACTTAAGCCCAAAAGCCAACTTAACAACAATTTGGGAGTCAGGCAAGCAAATATGTTCAAATTTATGGACCGGCTCGAGCAATATTTCAGACAATCCAAATTATGCTGGAAAATTTTGTTTCCAGGTGGCTTATATGGCATCATTAATTGAGTATGGTCTGTGTCTAGGTGACGTAGAAATAGTATTTGGTCCAGGTGATGTGTCCTGGACATTAGGTGCTGCATTGATTGAAGGGAAATTTCTATGGTTGAATACATCAAGCCACAAAGCCCAGAGTTTTTTTTCAACTCTAAAGAATGTCAAGGTCATGTCTTCTCCAACTCTTCTCTTTGCAGTACTTCTATTTCTTTTATTCATTGTTTATTGTAGTCAAGTGAAGCTACCAATGCCGGGTAGAAGGGCTTCCTCTCCTGGCTTATCTTTACCTTCTCATGTAAGACATCGATCTATCTGA 1638 0.3944 MEIPKSTFKDKRFSKHKWLLKIGASILITTLLLLGFHLESNYKAVNTSSYYTVVVDCGSTGTRVNVYEWMVEGKTVIVTNRDLPILLHSYPGNETRGSSLWKNSCQYHCLQTEPGLDKFVNDSFGVRQKLEPLIVWAENVVPNERHGETPVFVLATAGLRRLAIRDSDRVLDDVEAVLKDHSFMYRKSWVRVLSGREEAYYGWVALNYKMGSFGNFPNSSPTLGVLDLGGSSLQIMAEVDDAVDDVHEMRSNIGSVENQIVAYSFPAFGLNEAFDRTVLMLKNNQSMEKTGNNAEVRHPCLISTSVQNYTVTKKTEVHSLRLIGEPDWEQCKKVATAAAMNSSNFNVLLPTIGKNCRAGSFSDIGTGILNLTAIGHQIKRYHALSGFFFVYNKLNLSPKANLTTIWESGKQICSNLWTGSSNISDNPNYAGKFCFQVAYMASLIEYGLCLGDVEIVFGPGDVSWTLGAALIEGKFLWLNTSSHKAQSFFSTLKNVKVMSSPTLLFAVLLFLLFIVYCSQVKLPMPGRRASSPGLSLPSHVRHRSI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1956 545 Pfam GDA1/CD39 (nucleoside phosphatase) family 44 472 IPR000407 GO:0016787
Lan1g1956 545 Gene3D - 37 194 - -
Lan1g1956 545 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 9 543 - -
Lan1g1956 545 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 9 543 IPR000407 GO:0016787
Lan1g1956 545 MobiDBLite consensus disorder prediction 526 545 - -
Lan1g1956 545 Gene3D Exopolyphosphatase. Domain 2 195 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1956 Lan-Chr1 34823070 34825558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1956 22 476 Nodulin-like Gene Family AT4G19180 36.688 3.12e-85 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1956 - - gmx:100775757 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1956 1 34823070 34825558 Lan17g0123 17 717634 721548 PCT
Lan1g1956 1 34823070 34825558 Lan6g0096 6 635349 639819 PCT