Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1943 ATGGCTCTCAAACAATGGACTTATGAGCAAATAAAGGAAGTGTTCTTTTCTACCCTTCACCTATCTTTTTTCTTCATAATAAGCATCCTATTTTTGTTCAAGTTCTCAAGAAGAACCATATCCAAACTCAATCTACCTCCCTCCCCACCAAAATTACCAATCATTGGCCATCTTCATCTTCTAGGCTCACTGCCACACCGATCTCTTCAAAAACTCTCACACAACTATGGTGATATGATGTTTTTGCAACTTGGGCAGATGCAAACTCCAACTCTAGTGGTTTCATCTGGTGATGTAGCCATGGAAATTATGAAAAACCATGACCTAAATTTTTCAAACAGACCCCAATTTACAGCTCCAAAGATCCTATTGTATGGATGTAATGATGTTGCTTTTGGACTCTGTGGAGAAAATTGGAGAAACAAAAGAAAAATATTAGTCCTTCAACTTCTTAGCTCTAAAAGGGTGCAATCATTTTCCCATATAAGAGAAGAAGAAGTTGAAGAATGGATTAAAAAGCTACGTGAAGTAAGTTTGAGTGATGCATGTTCAGTGAATATAAGTGATATGTTTATGTCTATAGCAAACAATATTGTTTGCAAATGTGCTCTTGGACGCAAGTTCAGTGCAAGTGATGATGATGGTAACAACAAGGTCAAAGAGCTTGCAAGAAAGGTGACGATTCAACTTGCTGCATTCACAGTGAGAGATTACTTCTCTTGGTTGGGTTGGGTTGATGTTCTCACAGGTAAAATTGAGGAATATAAAGACACTTTTAGACAAATGGATACTTTATTGGATGAGGTAATTGAAGAGCATAAGAAAGTAGAGAAGGAAGGGAACAACTACTCTAGAATGAAAGACTTTGTGGATATCCTCCTCCAACTTCAAGCTAATGGCAAGCTTGACTTTGAACTCACCAACAATGATCTCAAACCACTTCTAATGGATATGTTTGTGGGAGGAACTGACACAACAGCAACAGTGTTAGAATGGACTTTTGTAGAGCTTATGAAAAACCCAATCATAATGAAGAAATCACAAGAAGAGGTGAGAAGAGTTATAGGGAAAAAATCAAAAGTAGAAGAAAATGATATTGATCAAATGCCCTACTTAAAGTGTGTAATCAAAGAGAGTCTAAGGTTACATCCATCTGCTCCTCTTATTCTTCCAAGGGAAACAATATCTAGTTTGAAATTGAATGGATATGATATTCCAGCAAAAACAATGGTATATATTAATGCATGGGCAATTCACAATGACCCTAAACTTTGGAAAAGCCCTAAAGAATTTATACCTGAGAGATTTGAAAACAATGATGTTGACTTTAAAGGTCAACATTCTCAGTTTATTCCATTTGGCTTTGGAAGAAGAGGATGCCCTGGAATGATATTTGGAAATACTTCAGTTGAATATGTTCTTGCTAGCCTTCTTTATTGGTTTGATTGGAAGTTACCTGAAACTTATAAATCTATAGATGATATAGATATGGGTGAAATATTTGGACTCATTACCTCAAAGAAAGAACCCCTTCATCTTAAACCAATAGCTTTCTCCCTTTAA 1563 0.3608 MALKQWTYEQIKEVFFSTLHLSFFFIISILFLFKFSRRTISKLNLPPSPPKLPIIGHLHLLGSLPHRSLQKLSHNYGDMMFLQLGQMQTPTLVVSSGDVAMEIMKNHDLNFSNRPQFTAPKILLYGCNDVAFGLCGENWRNKRKILVLQLLSSKRVQSFSHIREEEVEEWIKKLREVSLSDACSVNISDMFMSIANNIVCKCALGRKFSASDDDGNNKVKELARKVTIQLAAFTVRDYFSWLGWVDVLTGKIEEYKDTFRQMDTLLDEVIEEHKKVEKEGNNYSRMKDFVDILLQLQANGKLDFELTNNDLKPLLMDMFVGGTDTTATVLEWTFVELMKNPIIMKKSQEEVRRVIGKKSKVEENDIDQMPYLKCVIKESLRLHPSAPLILPRETISSLKLNGYDIPAKTMVYINAWAIHNDPKLWKSPKEFIPERFENNDVDFKGQHSQFIPFGFGRRGCPGMIFGNTSVEYVLASLLYWFDWKLPETYKSIDDIDMGEIFGLITSKKEPLHLKPIAFSL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1943 520 Coils Coil 252 272 - -
Lan1g1943 520 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 518 - -
Lan1g1943 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lan1g1943 520 PANTHER CYTOCHROME P450 71B11-RELATED 13 518 - -
Lan1g1943 520 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 Gene3D Cytochrome P450 36 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 SUPERFAMILY Cytochrome P450 46 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan1g1943 520 Coils Coil 344 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1943 Lan-Chr1 34698747 34701778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1943 46 518 Cytochrome P450 AT3G26320 43.487 4.37e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1943 K20617 - gmx:100803384 673.7