Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1927 ATGAGCACCACCACAACCACCAGTCTCACCGGCAGCGGCGGCGGAGAGGACCGTGTCCTTGCGACAGCTCAACAGATCATGAAAAGCCTCAACACTCCGAAAGATGTTCGCGAAGACATGCTCTTAATCTTCTCCAACTTCGATAACCGACTCTCCGGAATCTCAGACCTAATCAAAGGTGAAGAGTCCAACAACGACGACCTTCAACGGTTCCAAGCCGCCGAGAAAGTCATTCTCCGTTGGGACCCTTCCCTCTCTACCCGCCACTTCAACTCTCTCCTCGATTCCAAAAACGACGCCGTTGACTACTTCTCAGCGCTCGACGAAATCGTGAACTTCATGGAGAAATTGTCGGTCGCGCCGCCGCCGTCATGTGCTGAAAGAAGCGGACAAGTCATGGTGGAGCGTGCTGAAAACGCGATCCAGCTCGCGATGTCGAGGCTTGAGGACGAGCTACGACACGCGCTGATTCGCAACACTGTCCCGCTCGACGCAGAGAGACTCCGCGGTTCAATGAAGAGGGTTTCGCTCTCTTTCGCTTCTTCGCACGTGGACGAGAATTTGGAGAGTTTCGATGATCATGAAATCGGAGATCGCGGTTATGATCGGTTTCACTCGCGTGGTGCCAGCTTGGACGATCACGTGGTTGTCGATTTGGTGAATCCTGATGTGGTTGTTAAGCTAGGAGAGATGGTTGAGCGAATGGTAAGGTCTGGTTATGAAAGAGAGTGCCTTCAGGTTTATAGCAGTGTTCGTCGCGATGCTTTGGACGAGTGTTTGGTAATTCTTGGTGTTGAGAGATTGAGTATTGAAGAGGTGCAGAGGATAGAGTGGGAAAATTTGGATGAAAAGATGAAAAATTGGGTTCATGCAGTTAAGATTGCGGTTAGAGTATTGTTGTGTGGTGAGAAGAGATTGTGTGATAATGTGTTTGATGATTTGGATGAGATGAAGGAGATTTGTTTTAATGAGACTGCTAAGGGATGTGTGCTGCAGTTGTTGAATTTTGGCGAAGCTGTTACGATTTGTAAAAGATCGTCGGAGAAGCTGTTTAGGATATTGGATATGTATGAGGCTTTGAGGAATGTCTTGCCTGATTTGGAGGCTTTGGTTTCGGATGAGCTTGTGATTGGAGAGGTTAGAGGAGTCCTGAGTGGACTTGGTGAAGCTGCAAAGGGGACGTTTGCTGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAAAAGCTGGTCATAACTGGCGATGTTCATCCGCTGCCTCGTTATGTGATGAATTACCTTAAGTTGCTTGTGGATTATGGAGAACTTTTGAATTCAGTCTTACAAGTTAGTGATGAGGATCTTTACCGTTTTCAGAATGATTTTGGTGGTGATGGTTCTCAGTTTGAGTCCATGCCCCCCTTAGGGTGTCGAGTGCTGTTACTAATGTCCCAGCTTGAGTCTAATCTTGGGGAAAAATCAAGACTCTATGAAGACAACGCAATGCAGCAAGTATTTTTGATGAACAATCTCCATTACCTAGTGCGAAAAGTGAAAGACTCGGATCTTGGAAAGGTATTGGGAGATGATTGGATTCGCAAGCGACGCGGTCAGATACGCCAGTGTGCTACAGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGACGACGGGGTTGGAGGGAGCTCTAGGAGCTCATCAAAGATGGCTTTGAAGGAAAAGTTCAAGAATTTCAATGCATGTTTTGAAGAAATCTACAGGATTCAGACAGCTTGGAAGGTACCGGATGAGCAGCTTCGGGAAGAGCTACGAATATCTATATCAGAGAAGGTGATTCCTGCTTACCGCTCATTTCATGGGAGGTTTAGTAGTCAGCTAGATGGAAGGCATGCCGGGAGATATGTAAAGTATACACCGGACAGTTTAGAAATCTATTTATTGGATTTATTTGAAGGATATCCCGCTGTATTGAATCACATGAAGAGAAAAAGTACATAG 1989 0.4646 MSTTTTTSLTGSGGGEDRVLATAQQIMKSLNTPKDVREDMLLIFSNFDNRLSGISDLIKGEESNNDDLQRFQAAEKVILRWDPSLSTRHFNSLLDSKNDAVDYFSALDEIVNFMEKLSVAPPPSCAERSGQVMVERAENAIQLAMSRLEDELRHALIRNTVPLDAERLRGSMKRVSLSFASSHVDENLESFDDHEIGDRGYDRFHSRGASLDDHVVVDLVNPDVVVKLGEMVERMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRIEWENLDEKMKNWVHAVKIAVRVLLCGEKRLCDNVFDDLDEMKEICFNETAKGCVLQLLNFGEAVTICKRSSEKLFRILDMYEALRNVLPDLEALVSDELVIGEVRGVLSGLGEAAKGTFAEFENCIRNETSKKLVITGDVHPLPRYVMNYLKLLVDYGELLNSVLQVSDEDLYRFQNDFGGDGSQFESMPPLGCRVLLLMSQLESNLGEKSRLYEDNAMQQVFLMNNLHYLVRKVKDSDLGKVLGDDWIRKRRGQIRQCATGYLRASWSKALSCLKDDGVGGSSRSSSKMALKEKFKNFNACFEEIYRIQTAWKVPDEQLREELRISISEKVIPAYRSFHGRFSSQLDGRHAGRYVKYTPDSLEIYLLDLFEGYPAVLNHMKRKST* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1927 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 55 661 IPR004140 GO:0000145|GO:0006887
Lan1g1927 662 Gene3D Exocyst complex component Exo70 88 654 - -
Lan1g1927 662 Pfam Exo70 exocyst complex subunit 286 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan1g1927 662 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 55 661 - -
Lan1g1927 662 Coils Coil 134 154 - -
Lan1g1927 662 SUPERFAMILY Cullin repeat-like 71 648 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1927 Lan-Chr1 34539916 34544259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1927 17 661 EXO70 exocyst subunit family AT5G50380 59.556 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1927 K07195 - gmx:100818693 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0776 12 15004774 15007082 Lan1g1927 1 34539916 34544259 LSH
Lan1g1469 1 24690465 24692826 Lan1g1927 1 34539916 34544259 LSH
Lan15g0467 15 10904201 10908801 Lan1g1927 1 34539916 34544259 PCT