Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1926 ATGAGATGTATTTTCTTATTCAGCGTTCAAAAGGCTAAAGATTCGATATTTTACTCTTATAATAAATATATCAATGGCTTTGCTGCAATTCTAGATGAAGATGAAGCAGCTATGATTGCAAAGCATTCAAATGTAGTATCAGTTTTTGAAAGCAAATTTCGAAAATTGCACACAACTCACTCATGGGATTTTCTTGGATTAGAGAAAAATGGTGCAATCCCACATGACTCAATATGGAATAAGACAAAGGGGGAAGATATCATTATTGCAAATTTGGACACAGGTGTATGGCCTGAATCAAAAAGTTTTAGTGATGAAGGATTTGGACCGATCCCAAAAAAGTGGCGTGGAATCTGTCAAACTGACAATCAGAATCCAGATAAATTTCAATGCAATAGGAAACTTATAGGGACAAGATATTTTTCCAAAGGATTTGAAGCAGGTTCTCAACGTAAAGGAGATAATATCACATTTAATACTCCACGTGACTATCATGGCCATGGTTCACATACTTTATCAACTGCTGCTGGAAATTTTGTTGCTCAAGCAAGTGTATTTGGCAATGGCAACGGAACAGCGAGTGGTGGTGCACCGAAAGCTCGCGTCGTGGCCTACAAAGTTTGTTGGGGACCACGTGGTTCATGTAATGATGCAGACGTTTTAGCTGCTTTTGAGGCTGCCATAAGTGATGGGGTTGATGTGATTTCTATGTCATTGGGTGGAGATACTTCAGAATTTTTTAACAATGCTATTTCCTTAGGGTCATTCCATGCAATTGTCAATGGCATAATTGTAGTGAGTTCAGCTGGAAATTCTGGACCAAGTCCTCAAACAGTTCTGAATGTTGAACCATGGATGATCACAGTTGCTGCTAGCTCAATAGATCGAGAGTTCGCTAATTATATTAAGCTTGGTGACAACAAAGTCCTCAAGGGATCAAGCCTTTCGGAATTTGGGTCACCATCTGATAAGTTATATCCATTGATCAATGCTGTAGATGCTAAAGCTGATAATGTATCTGTTAGATACGCCCTTCAATGCAATGATGAATCTCTTGATCCTAACAAAGCCAAGGGAAAAATATTGGTCTGTAATACAAATCTAACTGATGCAATTGACCAAGGTGTAGAAGCTGCTCGCGTAGGAGCTTTTGGAATGATTTTGACTGACGACAAAAGTGCATTGAATATAATTAGACCTCAACCTCATGTGCTTCCTGCTTCGCGTGTTAACTTTACGGAAGGCAGTTACATTTTAAATTACATCAATCACACGAAGTCTCCTGTGGCTCAAATTTCTAGAGTGAAAACAGAATTAGGTATAAAACCGGCTCCAACAGTAGCTATATTTTCATCAAGGGGCCCTAATGTCATTGAGCCAGCAATCCTCAAGCCTGACATCATTGCACCAGGAGTTAATATCATTGCTGCATATTCTGAAGGAGTACCTCCGCAAAAAGGCACATCCGATAAACGCAGAACTCCGTTCATGACTGTGTCGGGTACTTCAATGGCATGCCCTCATGTTTCTGGTCTTGTTGGGTTGCTCAAAGCATTCCATCCTGATTGGAGTGCAGCTGCTATCAAGTCAGCAATCATGACCACAGCTACAATAAATGATAATAGAGGAAAACCAATTCTTGACCACTCGTTGGACAGGGCAACTCCATTTGACTATGGTGCAGGGCTTATTCAACCTAATCATGCAGTGGACCCAGGACTTGTATATGATCTAGACGTTACTGATTATTTGGACTTCTTGTGTGGCCGCGGCTACAACGGTTCGATAATTAAGTTGTTCTACGGCAAGCCTTACACTTGCCCTGAGTCGTTTAACATAGCTGATTTCAATTACCCATCAATCTCAATTCCTAACTTGGAGCATGGGCATTCTCAAAGTGTTACTCGTACTCTTACCAATGTTGGGTCTCCGAGTAAATATAGAGTGCACGTCAATGCACCTCCAGAAGTTATAGTTTCAGTTAAGCCTAAGTTTCTCAGATTTAAGGAAAAGGGTGAGAAGAAAGAATTTAGAGCTACATTTACCTTGAGAACACTTAATGAGTCCAAAACTGATTATTTCTTTGGATCAATTAATTGGGTAAGTCACAAGCACCATGTCAGAAGTCCTATAGTGGTTAAGCATCGACATGCATGA 2157 0.4015 MRCIFLFSVQKAKDSIFYSYNKYINGFAAILDEDEAAMIAKHSNVVSVFESKFRKLHTTHSWDFLGLEKNGAIPHDSIWNKTKGEDIIIANLDTGVWPESKSFSDEGFGPIPKKWRGICQTDNQNPDKFQCNRKLIGTRYFSKGFEAGSQRKGDNITFNTPRDYHGHGSHTLSTAAGNFVAQASVFGNGNGTASGGAPKARVVAYKVCWGPRGSCNDADVLAAFEAAISDGVDVISMSLGGDTSEFFNNAISLGSFHAIVNGIIVVSSAGNSGPSPQTVLNVEPWMITVAASSIDREFANYIKLGDNKVLKGSSLSEFGSPSDKLYPLINAVDAKADNVSVRYALQCNDESLDPNKAKGKILVCNTNLTDAIDQGVEAARVGAFGMILTDDKSALNIIRPQPHVLPASRVNFTEGSYILNYINHTKSPVAQISRVKTELGIKPAPTVAIFSSRGPNVIEPAILKPDIIAPGVNIIAAYSEGVPPQKGTSDKRRTPFMTVSGTSMACPHVSGLVGLLKAFHPDWSAAAIKSAIMTTATINDNRGKPILDHSLDRATPFDYGAGLIQPNHAVDPGLVYDLDVTDYLDFLCGRGYNGSIIKLFYGKPYTCPESFNIADFNYPSISIPNLEHGHSQSVTRTLTNVGSPSKYRVHVNAPPEVIVSVKPKFLRFKEKGEKKEFRATFTLRTLNESKTDYFFGSINWVSHKHHVRSPIVVKHRHA* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1926 718 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 713 IPR045051 -
Lan1g1926 718 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 57 IPR037045 -
Lan1g1926 718 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 6 713 - -
Lan1g1926 718 CDD PA_subtilisin_like 301 432 - -
Lan1g1926 718 SUPERFAMILY Subtilisin-like 56 574 IPR036852 GO:0004252|GO:0006508
Lan1g1926 718 Gene3D - 587 716 - -
Lan1g1926 718 Pfam Fibronectin type-III domain 615 713 IPR041469 -
Lan1g1926 718 Pfam Peptidase inhibitor I9 11 57 IPR010259 -
Lan1g1926 718 Pfam Subtilase family 84 547 IPR000209 GO:0006508|GO:0008236
Lan1g1926 718 Gene3D Peptidase S8/S53 domain 86 583 IPR036852 GO:0004252|GO:0006508
Lan1g1926 718 Gene3D - 295 439 - -
Lan1g1926 718 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Lan1g1926 718 CDD Peptidases_S8_3 55 537 IPR034197 -
Lan1g1926 718 ProSiteProfiles Serine proteases, subtilase domain profile. 61 570 - -
Lan1g1926 718 PRINTS Subtilisin serine protease family (S8) signature 84 103 IPR015500 -
Lan1g1926 718 PRINTS Subtilisin serine protease family (S8) signature 163 176 IPR015500 -
Lan1g1926 718 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1926 Lan-Chr1 34528455 34532554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1926 5 714 Subtilisin-like Serine Gene Family AT5G59810 56.303 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1926 - - vun:114175516 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1471 1 24708370 24714090 Lan1g1926 1 34528455 34532554 LSH