Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1912 ATGAACAAAATGAATTTTGTTAAGAATGGAATAAGCAGATTGCCACCTGGTTTTCGTTTTCAGCCAACAGATGAAGAACTTGTGTTTCAATACTTGAAATGTAAGGTCTTTTCATACCCCTTGCCTGCTTCTATTATTCCTGAGATCAATGTCTGCAAGTATGATCCTTGGGATTTGCCAGGGAACTGTGATGAGCAAGAGAGGTACTTTTTCAGCTCAAAGGAAACTAAGTATCCAAATGGTAATCGCATGAATAGAACAACCAACTCAGGTTATTGGAAAGCAACAGGAACAGATAAGAGAATTTCATCTTCAACTTCAACGTGTGATGGTGTTGTTGGGACAAGAAAAACTCTTGTTTTCTATGAAGGAAAATCTCCAAATGGCTCTAGAACTCATTGGGTCTTGCATGAATATCGACTTCTCACTATAGAAAACAACTATGTGAACGAGATAGGAGATTGGGTTCTATGTCGCTTATTGATGAAGAAAAGAAGTGTAATAGAAAGTGATGATAGCACTAGTTCCATGCATAAAATAAATACAACTCGAAATCTTCCAAGGTTGTTTGATTTTATGATGGTAAGTAAGAGTACCCATTCTCCAACATCCTCGTCATGTTCAAGTTCCAGCAATAATGTACAAGTGTCTTTAGATCATGAAGAAACAAGTGGTCATGCTCATTTTTAA 690 0.3681 MNKMNFVKNGISRLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKYDPWDLPGNCDEQERYFFSSKETKYPNGNRMNRTTNSGYWKATGTDKRISSSTSTCDGVVGTRKTLVFYEGKSPNGSRTHWVLHEYRLLTIENNYVNEIGDWVLCRLLMKKRSVIESDDSTSSMHKINTTRNLPRLFDFMMVSKSTHSPTSSSCSSSSNNVQVSLDHEETSGHAHF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1912 229 MobiDBLite consensus disorder prediction 200 229 - -
Lan1g1912 229 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 229 - -
Lan1g1912 229 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Lan1g1912 229 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Lan1g1912 229 MobiDBLite consensus disorder prediction 200 220 - -
Lan1g1912 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 229 - -
Lan1g1912 229 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Lan1g1912 229 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1912 Lan-Chr1 34333937 34335813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1912 1 166 NAC Transcription Factor Family AT5G13180 63.855 1.52e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan1g1912 NAM 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1912 - - gmx:100812015 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0750 12 14731553 14733063 Lan1g1912 1 34333937 34335813 LSH
Lan1g1912 1 34333937 34335813 Lan1g1488 1 25024806 25026806 LSH