Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1910 ATGGATGGTTGCCGCCGACATCAAGACTGTAGGCATAAGATGGAATACTACGGAGGAGGAGTACATTCCCCATGGAATATGGATGCCCAGCATCAGCGTGAAGTAAAGGAGCCAAATGCGCTAGTTATGAATAAGAAAATTAGGTCCATTATGGCCGAAAGACAGGCTGCCATTCTAGAACTTGAACTGGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCCCGAGATTTAGCTTTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCTGAAATGGAACGGGATATTGCCCTTGCAGCCCTTCAAAATCGGAACAATGCTGTCAACTTCCCATCAGGTGGAGTTCAATGTGGTTCAAAGCGGAAGCACCAATCTGCTTATAGCACAAAGGATATGCCAGTAAGGGATGCCACCCCAGCGACTGTTATAACTGCTGAAGCTGTCAAATCTCGTCAAGCTAAAAGATTGAAGGAGAACAAGGTAATTAATTCTAAGGCATCAAAGTCACCTACCAAATTAGGTAAAGATTTAAATAGGAACGCTTCTTCCCAAGGGACAAAAATCAAATCTGAATGGGATAAGCTTGATGTTGGCTTGAATTTGGTTGCATTTGATGAAACTGTCATGCCGGCCCCAGTTTGCACATGCACGGGAGTACCACGGCAGTGCTACAAATGGGGGAGTGGTGGATGGCAGTCATCTTGTTGCACCACGGCATTGTCAATGTATCCACTACCACAGCTTCCGGATAAGCGGCATGCACGCATTGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTGCTCAGTAAGTTGGCATCAGAAGGCCATGATTTATCCATATCGTTGGATCTTAAGAGTTACTGGGCCAGACATGGAACAAATCGCTACATTACCATCAAGTAA 921 0.4571 MDGCRRHQDCRHKMEYYGGGVHSPWNMDAQHQREVKEPNALVMNKKIRSIMAERQAAILELELEAAISEKNEALAARDLAFRQRDEALAQRDNAEMERDIALAALQNRNNAVNFPSGGVQCGSKRKHQSAYSTKDMPVRDATPATVITAEAVKSRQAKRLKENKVINSKASKSPTKLGKDLNRNASSQGTKIKSEWDKLDVGLNLVAFDETVMPAPVCTCTGVPRQCYKWGSGGWQSSCCTTALSMYPLPQLPDKRHARIGGRKMSGSVFTRLLSKLASEGHDLSISLDLKSYWARHGTNRYITIK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1910 306 Coils Coil 56 76 - -
Lan1g1910 306 SMART GAGA_bind_2 14 306 IPR010409 -
Lan1g1910 306 MobiDBLite consensus disorder prediction 167 189 - -
Lan1g1910 306 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 306 - -
Lan1g1910 306 PANTHER - 1 306 IPR010409 -
Lan1g1910 306 Pfam GAGA binding protein-like family 22 306 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1910 Lan-Chr1 34325194 34329345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1910 1 306 BBR or BPC Transcription factor family AT2G21240 53.896 4.84e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan1g1910 GAGA_bind 4.4e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1910 - - gmx:100813103 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0748 12 14720819 14724985 Lan1g1910 1 34325194 34329345 LSH