Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1906 ATGGCTCCCTCAGACCAATACTCTCTTGTCCCTTCATTCTTATACTCATCAAAAGCACTGTCCCATTTGGATACTACTTCCATCAACAACACCAATCATGTGTTACCATCATCATCAAATGATAGGAATAAGAATCCTATGATGATTCCTGCACCTAAGGAGAGTATTCCCTTGTTTTCTCCTACTTACTATGCTGCATGTTCTTTTGGTGGCATTTTTAGCTGTGGCCTTACACACATGGCTGTTACTCCCCTTGATCTTGTCAAGTGCAACATGCAGATTGACCCTAAAAAGTACAAGAGCATCACATCAGGGTTTGGAGTTTTATTGAAGGAGCAGGGAGCTAAAGGATTCTTTAGAGGATGGGTTCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGATTTTATGAGTTTTTCAAGAAATACTACTCAGATCTTGCAGGAGCAGAGAATGCAGTGAAGTACAAAACCTTCATATATCTAGCTGGTTCAGCTTCAGCAGAAGTGATTGCTGATATTGCCCTATGCCCTATGGAGGCTGTCAAAGTTCGTGTGCAAACTCAGCCTGGTTTTGCTCGAGGTTTGGCTGATGGCTTCCCCAAGTTTGTGAAGGCTGAGGGTGCTGGCGGGTTGTATAAAGGACTCGTTCCTCTTTGGGGCCGCCAGATTCCATATACAATGATGAAATTTGCATCCTTTGAGACTATTGTGGAGATGATATACAAATATGCCATTCCAACCCCTAAAGATCAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCAGGATATGCAGCTGGTGTACTATGTGCAATTGTCTCACACCCTGCTGATAATCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGGTTACTTGGTCTTTTCACTCGTGGCCTTCCACTACGTATAGTTATGATTGGAACACTAACTGGAGCCCAGTGGGGACTCTATGATTCTTTCAAAGTATATGTAGGACTGCCTACAACTGGTGGAAGTGCTCCTGCACCAACCAAGTAA 1065 0.4357 MAPSDQYSLVPSFLYSSKALSHLDTTSINNTNHVLPSSSNDRNKNPMMIPAPKESIPLFSPTYYAACSFGGIFSCGLTHMAVTPLDLVKCNMQIDPKKYKSITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGAENAVKYKTFIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLADGFPKFVKAEGAGGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKDQCSKNKQLGVSFAAGYAAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLLGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVYVGLPTTGGSAPAPTK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1906 354 Pfam Mitochondrial carrier protein 161 247 IPR018108 -
Lan1g1906 354 Pfam Mitochondrial carrier protein 64 148 IPR018108 -
Lan1g1906 354 SUPERFAMILY Mitochondrial carrier 63 334 IPR023395 -
Lan1g1906 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 260 339 IPR018108 -
Lan1g1906 354 Gene3D Mitochondrial carrier domain 64 340 IPR023395 -
Lan1g1906 354 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 354 IPR044677 GO:0005315|GO:1990547
Lan1g1906 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 159 243 IPR018108 -
Lan1g1906 354 PANTHER PHOSPHATE CARRIER PROTEIN 1 354 - -
Lan1g1906 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 62 146 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1906 Lan-Chr1 34275110 34278649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1906 4 352 Chloroplast and Mitochondria Gene Families AT5G14040 75.549 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1906 K15102 - gmx:100800530 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1906 1 34275110 34278649 Lan1g1494 1 25169537 25174477 LSH