Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1894 ATGTTCATGATGAAGGCTTATATGACTAGCAGAAATTTTTGCTGTGATCCTCTGAAAATATTGATGAGGTGGCTGATATTCTTCAGTGTCTTGAAACTCAGTTATGCAATCAAAGATCCTGATGTAGAAGGTGAAGCTCTACTTGATTTTTTGAAGAACCTCAATGATTCCAATAATCAAATAACAGATTGGGATAGTCATTTTGTGAGCCCATGCTTTAGTTGGTCTCATGTTACTTGTAGAAATGGACATGTCATAGCTCTGACCCTGGCTTCCCATGGATTTTCTGGAACACTGTCTCCCTCAATTGCAAAATTGAAATACTTGGTTAGCTTGGAATTACAGAACAACAATCTTTCAGGTTTATTACCTGATTACATTTCCAACTTGACAAACCTACAATATCTGAATCTTGCTGACAACAATTTTAAGGGTTCTATACCAGCTACATGGGGTCAACTTTCCAGTCTAAAGCATATGGATCTTTCATCAAATGATCTTACTGGAAGTATCCCAATGCAACTACTTTCAGTTCCAATGTTCAACTTTTCGGATACGGACCTTCACTGCGGAGAGGGCTTTGACCAGCCATGTGTTTCTAAATCTGAACATCCGGCTTCAACCCACAAATCAAAACTTAAAAAAGTTGTGCAATTTGCAAGTTGTGGTGCATTTGCAGTTCTGTGTCTTGGAGCTATCTTTACATATAGGTACTATCAAATGCACAGACACAAAAGTGATATCTTTGTTGATGTTTCAGGTGAAGATGAGTGCAAAATTTCATTTGGACAACTGAGAAGATTTTCTTGGCGTGAACTCCAAGTCGCTACTAAGAATTTCAGTGAAAGCAGTGTAATTGGCCAAGGAGGCTTTGGAAAAGTTTACAAAGGAATACTCTCAGATGATACAAAAGTTGCGGTGAAACGCCTCTCTGATTATAATAACCCGGGTGGAGAGGCGGCATTTGAAAGAGAAGTTCAACTTATAAGCGTGGCAGTTCATAGAAATCTCCTAAGACTCATAGGGTTCTGTACTACTGAAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGCGTAGCATACCAATTGAGAGATTTAAAATCCTATGAGAAAGGTTTGGATTGGCCAACAAGGAAAAAAGTGGCTTTTGGTACTGCACATGGTTTGGAGTATCTACATGAGCAATGTAATCCGAAGATAATACACCGTGATCTAAAGGCTGCAAACATCCTGCTAGATGATGAATTTGAAGCTGTTCTAGGCGATTTTGGGCTAGCCAAGTTAGTTGATACAAGGATGACTCATGTTACCACTCAAGTGCGGGGTACAATGGGCCACATTGCACCCGAATACTTGTCCACTGGAAAGTCATCAGAAAAGACAGATGTTTTTGGATATGGTATAACACTTCTTGAACTAGTCACAGGTCAGCGTGCAATTGACCTATCTCGCCTCGAAGAGGAGGAGGATGTTCTTCTGATTGATCATGTGAAAAAGCTACTAAGAGAAAACAGGCTAAGGGACATTGTGGACAACAATTTGGAGAGTTATGATCCAAAAGAAGTTGAGACAATTCTTCAGGTTGCATTGCTTTGCACGCAAGGCTTCCCCGAGGATCGGCCGACAATGTCAGAGGTAGTTAAAATGCTGCAAGGAGTTGGTTTGGCAGATAGATGGGTTGATTGGCAGAAACTTGAAGAGATTAGGAATCAAGAATTCTCACACATGACTCATCAATTTGTTTGGAGTGATGAATCTACTTTTGATCAAGAGGCTATACACCTTTCCAAAGCAAGATAG 1809 0.3986 MFMMKAYMTSRNFCCDPLKILMRWLIFFSVLKLSYAIKDPDVEGEALLDFLKNLNDSNNQITDWDSHFVSPCFSWSHVTCRNGHVIALTLASHGFSGTLSPSIAKLKYLVSLELQNNNLSGLLPDYISNLTNLQYLNLADNNFKGSIPATWGQLSSLKHMDLSSNDLTGSIPMQLLSVPMFNFSDTDLHCGEGFDQPCVSKSEHPASTHKSKLKKVVQFASCGAFAVLCLGAIFTYRYYQMHRHKSDIFVDVSGEDECKISFGQLRRFSWRELQVATKNFSESSVIGQGGFGKVYKGILSDDTKVAVKRLSDYNNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTETERILVYPFMENLSVAYQLRDLKSYEKGLDWPTRKKVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLIDHVKKLLRENRLRDIVDNNLESYDPKEVETILQVALLCTQGFPEDRPTMSEVVKMLQGVGLADRWVDWQKLEEIRNQEFSHMTHQFVWSDESTFDQEAIHLSKAR* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1894 602 Pfam Leucine rich repeat 109 167 IPR001611 GO:0005515
Lan1g1894 602 SUPERFAMILY Protein kinase-like (PK-like) 260 554 IPR011009 -
Lan1g1894 602 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Lan1g1894 602 Gene3D Phosphorylase Kinase; domain 1 249 356 - -
Lan1g1894 602 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Lan1g1894 602 Gene3D Transferase(Phosphotransferase) domain 1 357 573 - -
Lan1g1894 602 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Lan1g1894 602 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 19 602 - -
Lan1g1894 602 SMART serkin_6 280 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1894 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Lan1g1894 602 Pfam Protein kinase domain 281 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1894 602 SUPERFAMILY L domain-like 44 177 - -
Lan1g1894 602 PANTHER LRR RECEPTOR-LIKE KINASE 19 602 - -
Lan1g1894 602 ProSiteProfiles Protein kinase domain profile. 280 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1894 Lan-Chr1 34163988 34169272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1894 25 602 Receptor kinase-like Gene Family AT5G10290 54.305 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan1g1894 Pkinase 5.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1894 - - gmx:100800886 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1894 1 34163988 34169272 Lan1g1532 1 25792959 25797546 LSH