Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1881 ATGAAGATGCAAGGTTGTGAGGTTGAGGCTATTAGCATCAACTACAAGATCAACACAAAGAAAACAAAGCACCCTTTTAAAATCTTCACCAAACCTCCAACACCAGATATCAAACAAGATGGTCAAGAACCAGAAGAGGAAGTAAAAGCTGAACAAAGTTGCACTGGAGTTAAGCATGTCCTCAAGAATGTGACTTGCAGAGCCAAACCATGGGAAATCCTAGCAATTGTTGGGCCAAGTGGAGCTGGAAAATCATCACTGCTTGAAATTCTTGCTGGTAAAGTTACTCCACAGAGTGGTACTATCTTGGTGAACCACAAGCCTGTGGACAAATCTCAGTTCAAGAAGTTTTCAGGGTATGTTACACAAAAGGATACATTGTTCCCTTTACTTACAGTTGAAGAAACCATGATGTTCAGTGCAAAGCTAAAGCTAAAACTTCCACAAGAAAAACTATGTTCCAAGGTCAAGTCACTGATTAAGGAGCTTGGACTTGACCATGTTGCTGGGACTAGAATTGGCGATGACAGGGTCAGAGGGATATCCGGTGGAGAAAGGCGCCGAGTTTCTATTGGTGTTGAAGTTATACATGACCCAAGAGTGCTAATTCTGGATGAACCAACTTCAGGGCTAGATAGTAACTCAGCTTTGCAGATAGTTGAAATGCTTAAGGTCATGGCTGACACTAAGGGAAGAACTATAATCCTTAGTATCCATCAACCTGGGTTCAGAATAGTAAAATTGTTCAATTCAATGCTATTGTTAGCTAATGGATGTGTGTTACACCATGGCACTGTGGAGTTGTTGGATGTGAATCTAAGGCTAATGGGTTTAGAGCTTCCTCTTTATGTTAATGTTGTTGAATTTGCCATCGAGTCCATTGATGCCATTCAGCTAGAAACTCCGAGGCGATTGCAAGGGGCAATGCAACAGAAGAAAGGTGATGATACAGAAGAACCAAGTGAGTGTAGGAGTGGTAAGTTTACTCTACAACAGCTCTTTCAACAGTCCAAGGTGATTGATGAAGAAATCATCAATGCTGGGATGGATTTCCCTTGTGATTTTGCTAATTCTAGACTGGGAGAAACTGTGATTCTCACTCGAAGGTTCTCGAAAAACATTTTTCGTACAAAAGAGCTATTTGCGTGTAGGACAATCCAGATGCTGGTTTCAGGGCTTGTTCTGGGTTCCATCTTTTGTAACCTGAAGGATGATCTAGTGGGAGCAAGAGAAAGGGTTGGCCTATTTGCTTTCATATTAACATTTTTGTTATCAACCAGCATAGAAGCTCTACCAATCTTTCTGCAGGAAAGGGAGATTCTGATGAAGGAGACTTCTTCTGGAAGCTACCGCGTATCGTCCTATGCTATCGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATCTTAGCCATTTTGTTCTCATTGCCCTTATACTGGCTTGTTGGTCTCAACAGGAATTTCATGGCATTTTTGCAGTTTCTGTTGCTGATATGGCTGATTCTTTATACAGCAAATTCAGTTGTGGTGTGTTTCAGTGCTTTAGTTCCTAATTTCATTGTTGGGAATTCATTGATTGCTGGTGTCATTGGCTCATTCTTCTTATTCTCTGGATACTTCATATCAAATCATGAAATTCCTAACTACTGGGTTTTCATGCATTACATATCTCTGTTCAAGTATCCCTTTGAAGGGTTCCTGATAAATGAGTTCTCCAACTCAGGGAAATGCTTGCAGTACATGTTTGGGGAATGCATGCTGAGAGGGGAAGGTGTGCTTAAAGAAGAAGGATATGGAGGAGAGAGCAGTAGATGGAAGAATGTGGGGGTCATGGTGTCCTTCATCTTCTTTTACAGGTTCATTTATTATGTCATTCTTAGATACAGATGCTCACAGAGAGGGTTCAAGAGTGTTATCATCATCTAA 1926 0.4107 MKMQGCEVEAISINYKINTKKTKHPFKIFTKPPTPDIKQDGQEPEEEVKAEQSCTGVKHVLKNVTCRAKPWEILAIVGPSGAGKSSLLEILAGKVTPQSGTILVNHKPVDKSQFKKFSGYVTQKDTLFPLLTVEETMMFSAKLKLKLPQEKLCSKVKSLIKELGLDHVAGTRIGDDRVRGISGGERRRVSIGVEVIHDPRVLILDEPTSGLDSNSALQIVEMLKVMADTKGRTIILSIHQPGFRIVKLFNSMLLLANGCVLHHGTVELLDVNLRLMGLELPLYVNVVEFAIESIDAIQLETPRRLQGAMQQKKGDDTEEPSECRSGKFTLQQLFQQSKVIDEEIINAGMDFPCDFANSRLGETVILTRRFSKNIFRTKELFACRTIQMLVSGLVLGSIFCNLKDDLVGARERVGLFAFILTFLLSTSIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFSLPLYWLVGLNRNFMAFLQFLLLIWLILYTANSVVVCFSALVPNFIVGNSLIAGVIGSFFLFSGYFISNHEIPNYWVFMHYISLFKYPFEGFLINEFSNSGKCLQYMFGECMLRGEGVLKEEGYGGESSRWKNVGVMVSFIFFYRFIYYVILRYRCSQRGFKSVIII* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1881 641 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 629 - -
Lan1g1881 641 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 629 - -
Lan1g1881 641 Gene3D - 47 277 IPR027417 -
Lan1g1881 641 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Lan1g1881 641 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Lan1g1881 641 SMART AAA_5 70 267 IPR003593 -
Lan1g1881 641 Pfam ABC-2 type transporter 364 571 IPR013525 GO:0016020|GO:0140359
Lan1g1881 641 MobiDBLite consensus disorder prediction 26 46 - -
Lan1g1881 641 CDD ABCG_EPDR 55 264 - -
Lan1g1881 641 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 282 IPR003439 GO:0005524
Lan1g1881 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 268 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1881 Lan-Chr1 34001810 34004243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1881 29 269 Calmodulin-binding Proteins AT2G36910 24.696 4.66e-12 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0693 12 13742952 13745410 Lan1g1881 1 34001810 34004243 LSH