Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1867 ATGGCTGCCATGAATTCTAGTGTCTTGGCTTGTACCTACACCATATCTGGTTCTGGTTGCTCAGAACTCAATGCTAAGCTCACTTCCATGCCTTCAGTTGCATCACCACCAGTCTCTGGTCAGAAGTTGCATGTGATCAAGGCTCAGCAAGCCAGAATTCCACAAGCCAAAGAATCACAAGCAAGTGAAGGAAGAAGAGGTGCCCTTGTTTTCTTGGCAGCTACCCTTTTTAGCACTGCAGCTATTGCTTCAAATTCTGCTGCCAATGCTGGTGTCATTGAAGATTACCTTGAAAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAGAGGTTAGCTACAAGTGGAGCAAATTTTGCTAGAGCATACACTGTGCAATTTGGCACTTGCAAATTCCCTGAGAATTTCACTGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTTATTTCCGATGATTTGGAGCTTGAGTGCGAAGGAAGGGACAAATACAAGTGTGGTTCGAATGTTTTCTGGAAGTGGTGA 528 0.4451 MAAMNSSVLACTYTISGSGCSELNAKLTSMPSVASPPVSGQKLHVIKAQQARIPQAKESQASEGRRGALVFLAATLFSTAAIASNSAANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGRDKYKCGSNVFWKW* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1867 175 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 175 IPR008796 GO:0009522|GO:0015979
Lan1g1867 175 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 175 IPR008796 GO:0009522|GO:0015979
Lan1g1867 175 Gene3D - 91 175 IPR044907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1867 Lan-Chr1 33836637 33838110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1867 1 146 Calmodulin-binding Proteins AT5G64040 66.000 4.25e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1867 K02701 - jre:109021950 283.493