Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1855 ATGCCAATGATGTTTCAAATTCCTGGTTTGAATATGGAGAAGGAGATGTCTGATATAGTCTCAGCTTTAACTCATGTTGTTTGTGGAGATATACCTAAAGGTGATGATTATAAGGTTCTTCATCATAATATAGATCATAGTGTAATAGTAGGAAGTGGTGTTGATACTTTTGATGCAACACTATCTTCCTCTTCTTCATCTTATGGTGGCAAGAGAAAGAGGGAACATGATATACCCTTTTGTGATTTCTCAATCTCAAATGCTGATTCATCTTATGCTACTACACCAATTGCACAATGTTCAAGAAACTGGACCAACACAACAACAACAACAGAAACAAGCCAAAGCCAAATAGGAACAAATCCTGCATATGAATACAGAACAGACAATGTGAGAAATCAAGAGCAACATCAACAAAAACAAAAACAACCACAAAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGAAAATGGGCTGCAGAAATAAGAGACCCTTTCAAAGCATCAAGAGTGTGGTTAGGAACATTTGAAACAGCTGAAGCAGCAGCTATAGCATATGACAAAGCTTCTTTGAATTTCAGAGGCAACAAAGCAAAACTCAACTTCCCTGAAAATGTGAGACTCATAAGGCAACAACAACAACAACAACCTCTCAAACCAAAATCACCTACCATTTTGTCCATTGCACCAGCCACTGAGCCTGTAGTTAAGCCTGAAGATCTAAGCATTTTGCAGGGTTCTTATGCATATGCCCCTTCTAGTAGTTTTTATGAGTATTCTCATTTTTGA 792 0.3801 MPMMFQIPGLNMEKEMSDIVSALTHVVCGDIPKGDDYKVLHHNIDHSVIVGSGVDTFDATLSSSSSSYGGKRKREHDIPFCDFSISNADSSYATTPIAQCSRNWTNTTTTTETSQSQIGTNPAYEYRTDNVRNQEQHQQKQKQPQRKYRGVRQRPWGKWAAEIRDPFKASRVWLGTFETAEAAAIAYDKASLNFRGNKAKLNFPENVRLIRQQQQQQPLKPKSPTILSIAPATEPVVKPEDLSILQGSYAYAPSSSFYEYSHF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1855 263 CDD AP2 148 206 IPR001471 GO:0003700|GO:0006355
Lan1g1855 263 SMART rav1_2 147 210 IPR001471 GO:0003700|GO:0006355
Lan1g1855 263 MobiDBLite consensus disorder prediction 132 153 - -
Lan1g1855 263 Pfam AP2 domain 147 196 IPR001471 GO:0003700|GO:0006355
Lan1g1855 263 PANTHER DNA-BINDING DOMAIN PROTEIN 17 261 - -
Lan1g1855 263 ProSiteProfiles AP2/ERF domain profile. 147 204 IPR001471 GO:0003700|GO:0006355
Lan1g1855 263 PANTHER DNA-BINDING DOMAIN 17 261 IPR044808 GO:0003700|GO:0009873
Lan1g1855 263 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Lan1g1855 263 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Lan1g1855 263 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Lan1g1855 263 Gene3D AP2/ERF domain 146 206 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1855 Lan-Chr1 33665037 33666915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1855 7 242 AP2-EREBP Transcription Factor Family AT5G64750 43.200 8.16e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan1g1855 AP2 7.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1855 - - lang:109361580 495.352