Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1850 ATGAAAACTTCACACAACACCATCAACTACCACTTCTCCTTCACCCTCTTCATAACACTCCTCACAACAACAACAACAACAACATCATCATTTTCCACTCATGAGGTGCAACTTTCACAACTCATAAACTTCAAAAATTCTCTCCCAAACCCTTCTACCCTCTCAAACTGGGCACCATACCCTACAACAACAAACCCATGTTCCTTCACTGGCATCACATGCACTCCACAAACTAACCATGTTTCCTCTATAAACCTCACTGGAATCACTTTATCTACCACTTTCACTCTTGTATCAACCCATCTTCTAACACTTCCTTATCTTCAAACTCTCACTCTTAAGTTAACTAACCTCTCCGGTTCTCTTCCTATGCTTATAAACTGCACTACCTCACTCACTTTCATTGACCTTTCTCATAACATGCTTACCGGTGAAACTGATTTTTCCGGTTGCAGTAACTTGCACCATCTTAACATTTCTTATAATAATTTCTCTGAAACTGTTCCTTCTTTTGGTGATTGTTCTAAACTTGAGTTTCTTGATATCTCCGGTAACCAGTTTTCCGGCGACTTCAGTGAAAAACTTTCTGGTTGTGATAGTTTATTGTACTTGAATGTTTCTAGTAATAAATTATCTGGTTCTGTTTCTTTGCTTCCTCGTGATATAAAGTTTCTCTACCTTGCTGGAAATAGTTTCCTGGGAGAGATTCCGGCGAGGCTGGCGCAATTATGCTCCAGCCTCGTCGAACTTGATCTTTCCTCGAATAATTTCTCGGGTACGATTCGGGCTGGTTTTAGTTCTTGTTTGGGGTTGGAGTCATTGGTTCTTAACCACAATGAATTTTCTGGTGAATTACCGGTTGAGGTATTGGAGAAAATGAGGAGATTGAGAAGGCTTTCGCTTTCGTTCAATGGGTTTTCGGGTCAGTTACCAGAGTCGTTGTCGAAGATGGTGAGTTTGGAGTTTTTGCATTTGAGTTCTAACAAGTTTGAAGGGTCAATACCAAGAGGGTTATGTGAGGATCCTATGAATAGTTTGAAGGAATTGTACTTAGAGGATAATTTGTTAACTGGTTTTATTCCACCTTCACTTGGTAACTGTTCTCAACTTGTTGCTTTGGATTTGAGTTTCAATTACTTGAAAGGTACTATCCCTTCAAGTTTAGGGTCTCTCTTGAATCTTCGAGATTTGATCATTTGGTTTAATCTTCTCAATGGAGAAATTCCACAAGAATTGATGTATGTTAAGACACTTGAAAATTTGATCCTTGATTTTAATGAGTTGAGTGGTGAGATTCCTTCTGGCCTAAGCAACTGCACGAAGTTGAATTGGATTTCCTTGTCGAATAATAAGCTCAGTGGGGAGATTCCAGCATGGATTGGCCGGTTATCCAATCTTGCTATCCTGAAATTGAGTAACAATTCCTTCTCTGGAAGGATTCCGCCACAGCTCGGTGATTGTCGCAGCTTGATATGGTTGGATCTGAATACTAATTACCTTAGTGGGCCGATTCCTCTGGAGTTGTTTAAGCAATCAGGCAAGATTGTGGGTAATTTCATGAGTGGGAAGACATTTGTGTACATCAAGAATGATGGTAGTAAGGGTTTCCATGGAGCAGGAAGTTTGCTTGAGTTTGTCGGGATCAGGCCGGACCAGATGAACAGGATATCAAACAGGACATCTTGGAATATCACTAGATGTTATCAAGGTAAGCTTCGGCCGCCTACGTTTTACCACAACGGTTCCATGCTTTTCTTGGATGTTTCACATAATATGTTGTCTGGTAATATTCCCAAGGAGATTGGGAGTATGTTCTATTTATACATTCTGAATTTGGGCCATAATGATATATCTGGAAACATCCCAGAAGAGCTTGGAAACTTGAAAAATATTGGCATACTTGATCTCGGTAGCAACAGGCTCGAAGGACAAATTCCACAATCCTTAACCTACCTATCCTTACTCACGGAAATTGATTTGTCAAACAACCTTCTATCAGGTCCGGTGCCTGGATCAGGGCAATTTTTAACTTTTCCTGCTAGTAGATTCTTGAATAACTCTGGTTTATGTGGAGTTAATCTCACTCCATGTGGCGAAAACTCAGGATCTATTACAAATGTAAAGCATCGGAAGTCGCATAGGAAACAGGTAACTGTAGCAACAAATGTGGTCATGGGAATACTATCCTTCTTGTTCTGCATCTTTGTTTTTGTTATAATCGCCGTTGAGACCAGAAGAAGAAGGAAGAAAAAGGAAGGTGTGCTTGATGTCTACGTTGACAGCTGTTCTCATTCAGGGACAGCTAATGTTGGCTGGAAGCTGACCGGTACTCGTGAAGCACTTAGCATAAACCTTGAGACATTTGAGAATTCCCTTCTAAAGCTTACTTTCGCCGATCTTCTTGAAGCTACCAATGGCTTTCACAGTGACAGCATTGTTGGTTCTGGTGGTTTCGGTGTTGTCTACAAGGCTCAATTGAAGGATGGGAGTGTTGTGGCTATCAAAAAACTTATACATGTTAGTGGACAAGGGGATAGGGAGTTCACTGCCGAAATGGAAACCATAGGGAGAATCGAGCACCGAAACCTTGTTCCACTTCTTGGCTACTGCCAAGTTGGAGAAGAGAGGCTTTTGGTTTATGAATACATGAAATATGGAAGCCTAGATATTCTGCATGATCAAAAGAAAGCAGGGATCAAGCTTGATTGGGCAGCAAGGAAGAAAATCGCGGTTGGTGCAGCTAGGGGATTGGCTTTTCTTCACCACAATTGTACTCCACACATCATTCATAGAGACATGAAATCAAGCAATGTATTGCTTGATGAAAATTTGGAGGCTAGAGTTGCCGATTTTGGAATGGCTAGGCTTGTGAATGTTATGGATACTCATTTAAGTGTCAGCACACTAGCCGGAACCCCTGGCTATGTTCCTCCAGAGTACTATCAAAGCTTTAGATGTTCAACTAAAGGCGATGTTTATAGTTATGGTGTAGTCTTATTGGAGCTTCTTACAGGCAGAAAACCAACAGATTCAAGTGATTTCGGTGATGACAATCTCGTGGGATGGGTTAAACAACTTGCCAAACTGAGAAAAGTTGATGTTTTCGACCCCGAGCTTAGGAAAGAGTATCCGAATCCTGAGCTTGAGCTTATGCAGTACTTAAATGTTGCTTTTGCTTGCTTGGATTATCGACCGTGGAAGCGCCCGACAATGATTCAGGTCATGGCAATGTTTAAGGAAATCCAAGTAGGATCTGATATACATTCCAAGTCTACAATTGCCGCCGAAGATGGAGGTTTTGGTGCTGTTGAAATGGTAGACATGAGCATAAAAGAAGCCACTGAATTAAGCAAGGTGTAG 3360 0.4116 MKTSHNTINYHFSFTLFITLLTTTTTTTSSFSTHEVQLSQLINFKNSLPNPSTLSNWAPYPTTTNPCSFTGITCTPQTNHVSSINLTGITLSTTFTLVSTHLLTLPYLQTLTLKLTNLSGSLPMLINCTTSLTFIDLSHNMLTGETDFSGCSNLHHLNISYNNFSETVPSFGDCSKLEFLDISGNQFSGDFSEKLSGCDSLLYLNVSSNKLSGSVSLLPRDIKFLYLAGNSFLGEIPARLAQLCSSLVELDLSSNNFSGTIRAGFSSCLGLESLVLNHNEFSGELPVEVLEKMRRLRRLSLSFNGFSGQLPESLSKMVSLEFLHLSSNKFEGSIPRGLCEDPMNSLKELYLEDNLLTGFIPPSLGNCSQLVALDLSFNYLKGTIPSSLGSLLNLRDLIIWFNLLNGEIPQELMYVKTLENLILDFNELSGEIPSGLSNCTKLNWISLSNNKLSGEIPAWIGRLSNLAILKLSNNSFSGRIPPQLGDCRSLIWLDLNTNYLSGPIPLELFKQSGKIVGNFMSGKTFVYIKNDGSKGFHGAGSLLEFVGIRPDQMNRISNRTSWNITRCYQGKLRPPTFYHNGSMLFLDVSHNMLSGNIPKEIGSMFYLYILNLGHNDISGNIPEELGNLKNIGILDLGSNRLEGQIPQSLTYLSLLTEIDLSNNLLSGPVPGSGQFLTFPASRFLNNSGLCGVNLTPCGENSGSITNVKHRKSHRKQVTVATNVVMGILSFLFCIFVFVIIAVETRRRRKKKEGVLDVYVDSCSHSGTANVGWKLTGTREALSINLETFENSLLKLTFADLLEATNGFHSDSIVGSGGFGVVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGRIEHRNLVPLLGYCQVGEERLLVYEYMKYGSLDILHDQKKAGIKLDWAARKKIAVGAARGLAFLHHNCTPHIIHRDMKSSNVLLDENLEARVADFGMARLVNVMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRKPTDSSDFGDDNLVGWVKQLAKLRKVDVFDPELRKEYPNPELELMQYLNVAFACLDYRPWKRPTMIQVMAMFKEIQVGSDIHSKSTIAAEDGGFGAVEMVDMSIKEATELSKV* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1850 1119 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Lan1g1850 1119 Gene3D - 520 578 - -
Lan1g1850 1119 Pfam Protein kinase domain 807 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1850 1119 PANTHER SYSTEMIN RECEPTOR SR160 148 1091 - -
Lan1g1850 1119 PANTHER SYSTEMIN RECEPTOR SR160 13 146 - -
Lan1g1850 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Lan1g1850 1119 SMART LRR_typ_2 317 341 IPR003591 -
Lan1g1850 1119 SMART LRR_typ_2 343 367 IPR003591 -
Lan1g1850 1119 SMART LRR_typ_2 463 487 IPR003591 -
Lan1g1850 1119 SMART LRR_typ_2 652 675 IPR003591 -
Lan1g1850 1119 SMART LRR_typ_2 415 439 IPR003591 -
Lan1g1850 1119 SMART LRR_typ_2 293 316 IPR003591 -
Lan1g1850 1119 Pfam Leucine Rich Repeat 345 367 IPR001611 GO:0005515
Lan1g1850 1119 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 146 - -
Lan1g1850 1119 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 148 1091 - -
Lan1g1850 1119 SUPERFAMILY RNI-like 221 505 - -
Lan1g1850 1119 SUPERFAMILY Protein kinase-like (PK-like) 788 1078 IPR011009 -
Lan1g1850 1119 SUPERFAMILY L domain-like 34 286 - -
Lan1g1850 1119 ProSiteProfiles Protein kinase domain profile. 807 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1850 1119 Gene3D Transferase(Phosphotransferase) domain 1 886 1083 - -
Lan1g1850 1119 CDD STKc_IRAK 813 1081 - -
Lan1g1850 1119 Gene3D Phosphorylase Kinase; domain 1 770 882 - -
Lan1g1850 1119 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Lan1g1850 1119 SMART serkin_6 807 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1850 1119 SUPERFAMILY L domain-like 545 690 - -
Lan1g1850 1119 Gene3D Ribonuclease Inhibitor 75 698 IPR032675 -
Lan1g1850 1119 Pfam Brassinosteroid receptor island domain 513 577 IPR045381 -
Lan1g1850 1119 ProSitePatterns Protein kinases ATP-binding region signature. 813 836 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1850 Lan-Chr1 33595260 33599000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1850 98 361 Receptor kinase-like Gene Family AT4G39400 30.909 2.99e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lan1g1850 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1850 K13415 - gmx:100499629 1460.28