Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1846 ATGGACTTAGCACTACCATATACAATGGAACACTATTTTGTAAACCCTCATCCTAATCCCAATTATGATCACTCTTCAAATTTAGCACTACCATCTACAATGGAGGCCTCATCAGATTTCATATTATCTGATTATCTCATACTAGATGATATTGTTGTTGATAATCAAGAATCTTGGTCACAAAGTACTGAATCATCAGAGAAAGCAAATCATAGCCATGTCAATCATGGTCTCAATTATGGTGCAACCTCAAAGAACAATAATAACATAAATGATACTAAGAGAAGTAAGACAGAAATGAGTTCAAGGATTGCGTTTAGAACGAGATCAGAACTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAATCCGTGAAGAACAGTCCCAATCTAAGGAACTATTACAAATGTTCATTTGAAGGATGCAATGTGAAGAAAACAGTTGAAAGAGATAGAGATGATTCAAGTTATGTGATAACAACTTATGATAGTGTGCACAATCATGAGAGCCCATTTTCCACCTCCTACACTCAAATCTCATCCTTTCTGAGTTCTGATTCTTAG 576 0.3524 MDLALPYTMEHYFVNPHPNPNYDHSSNLALPSTMEASSDFILSDYLILDDIVVDNQESWSQSTESSEKANHSHVNHGLNYGATSKNNNNINDTKRSKTEMSSRIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNLRNYYKCSFEGCNVKKTVERDRDDSSYVITTYDSVHNHESPFSTSYTQISSFLSSDS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1846 191 SUPERFAMILY WRKY DNA-binding domain 107 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g1846 191 MobiDBLite consensus disorder prediction 62 95 - -
Lan1g1846 191 ProSiteProfiles WRKY domain profile. 110 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1846 191 Gene3D WRKY domain 99 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g1846 191 MobiDBLite consensus disorder prediction 62 102 - -
Lan1g1846 191 Pfam WRKY DNA -binding domain 116 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1846 191 SMART WRKY_cls 115 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1846 191 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 178 IPR044810 GO:0003700
Lan1g1846 191 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 15 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1846 Lan-Chr1 33505337 33508334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1846 99 183 WRKY Transcription Factor Family AT5G64810 67.059 4.45e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g1846 WRKY 3.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1846 - - gmx:100500248 218.779