Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1828 ATGACACAGCAGAATGTGGTAGTGTCTGATACAAAACCAAGAATCAAAAGGGTTTCACAAAAGCCTCTAGCGGTGCCAGGAAGGTACATTCAATATTCATATCCAATGAGTAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGAACAAAGAATTGATACATGGGTTGATTCCATGAGAGCCTCTTCTCCAACTCATGCAAAATCCAATCTTTCTTTGGCTGAAGAACAATACACCTCTTGGAGTCTTAGACACCCTTCAGCATTAGACATGTTTGAACAAATTGTGGAAGCTTCACAGGGAAAGCAAATTGTTATGTTCCTGGATTATGATGGAACCCTGTCTCCTATAGTCAATGATCCTGATTGTGCTTTCATGTCTGATTCTATGAGAAATACAGTGAGGAATCTTGCAAGGTGTTTTCCCACTTCCATAGTCACTGGTAGATGCATAGAGAAGGTATACAATTTTGTTCAGTTGGCAGAGCTATATTATGCTGGATGCCATGGTATGGATATTAAAGGACCATCAACGAGCTTCAAATTCAACAAAGATAAAAAATCTGAGGAAATTCTTTTTCAACCTGCCAGTGAATTTCTTCCATTGATAGCTGAGGTGTACCAAGAATTGGTTGAGAAAACTAAATCAACTGCTGGAGCCAGGGTTGAGAATAATAAATTTTGTGCCTCGGTCCATTTTCGTTGTGTTGATCAAAAGAAATGGAGTGAACTTGCACAACAAGTGAGATCAGTGTTAAAGGAGTACCCAAAGCTTCGTCTCACACAAGGAAAAAAGGTATTGGAGGTTCGTCCCACTATTAAATGGGACAAAGGGAAGGCCCTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTCTACCGATGTCTTTCCTATTTATATTGGTGATGATAAAACAGATGAAGATGCATTTGAGAAACTAATAGACAGAGGACAAGGTCTTGGAATTATTGTTTCAAAATTTCCCAAGGACACTAGTGCATCATACTCTTTACAAGAACCAAATGAGGTGATGGATTTCCTTCAGCGTTTGGTTGAGTGGAAACAAGTTAGAACACGTTCCCGGGTGTAA 1092 0.3947 MTQQNVVVSDTKPRIKRVSQKPLAVPGRYIQYSYPMSRRVLKNLEINGEQRIDTWVDSMRASSPTHAKSNLSLAEEQYTSWSLRHPSALDMFEQIVEASQGKQIVMFLDYDGTLSPIVNDPDCAFMSDSMRNTVRNLARCFPTSIVTGRCIEKVYNFVQLAELYYAGCHGMDIKGPSTSFKFNKDKKSEEILFQPASEFLPLIAEVYQELVEKTKSTAGARVENNKFCASVHFRCVDQKKWSELAQQVRSVLKEYPKLRLTQGKKVLEVRPTIKWDKGKALEFLLESLGFANSTDVFPIYIGDDKTDEDAFEKLIDRGQGLGIIVSKFPKDTSASYSLQEPNEVMDFLQRLVEWKQVRTRSRV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1828 363 Gene3D - 195 362 IPR023214 -
Lan1g1828 363 Gene3D - 104 194 IPR023214 -
Lan1g1828 363 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 3 360 - -
Lan1g1828 363 CDD HAD_TPP 105 345 - -
Lan1g1828 363 SUPERFAMILY HAD-like 105 354 IPR036412 -
Lan1g1828 363 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 106 316 IPR006379 -
Lan1g1828 363 Pfam Trehalose-phosphatase 107 341 IPR003337 GO:0003824|GO:0005992
Lan1g1828 363 TIGRFAM T6PP: trehalose-phosphatase 102 352 IPR003337 GO:0003824|GO:0005992
Lan1g1828 363 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 3 360 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1828 Lan-Chr1 33202885 33206118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1828 106 351 Trehalose Biosynthesis Gene Families AT1G70290 25.843 4.50e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1828 K01087 - gmx:100794430 562.377