Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1817 ATGGCCATTACACCTTTTGGTAGTACATCTGCTGCACAATGGGGAATTCACCCCCAGCTTTCACTAAGATCTAGTATGACAGGCAAGATTGCATCATCCAGCCACAATGTTATAAGCAGAGTAAGCTTTATGGGTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCGTGCATCATACACTATCCAGTGTGGGTTCTTCTCAAACACTGCATTCTCGCAGGGGATCAAGGCTGACTGTTAGAGCTAATGCAGATTACTATTCTGTCCTTGGAGTTTCAAAAAATGCTAACAAATCTGAAATTAAGAGCGCTTATCGGAAGCTTGCCAGGAATTATCATCCAGATGTTAACAAAGAACCTGGAGCAGAAGATAAATTTAAGGAAATCAGCAATGCATATGAGGTATTATCAGATGATGAGAAACGATCGATATACGATAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGGAATGAACCCTGGGGATTTCAGCAATCCTTTTGATCTGTTTGAGCAACTGTTTGACAACATGAATCGTGGCTCGGGCAGAGGTCCTTATAATGGACCAGTTGATGGTGAAGATGAGTATTACAGTCTTCTTTTGAACTTTAAAGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGTTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACTACACCATCCAGATGCAACACTTGTGGTGGTCAAGGCCGGGTTGTCTCATCAACAAGAACTCCACTAGGTGTCTTCCAGCAGCAGATGACATGCTCTACATGTAACGGAACTGGAGAAATCTCAACACCTTGCAATACGTGTTCTGGGGACGGTCGAGTGAGGAAACCAAAGCGGATAAGTCTGAAGGTTCCAGCTGGTGTGGACTCTGGTAGTCGTTTAAGGGTCCGAAATGAAGGGAATGCTGGAAGGCGAGGGGGTTCTCCCGGTGACCTCTTTGCTGTAGTTGAGGTCATACCAGATCCTGTCCTTAAACGAGATGACACCAACATTTTATACACCTGCAAAATTTCATACATCGATGCAATCTTGGGGACTACAATTAAGGTTCCTACGGTAGACGGGATGGTGGATTTAAAAGTTCCAACTGGGACCCAACCAAACACAACACTTGTTCTGGCTAAGAAAGGTGTTCCTCTGCTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGTGTTCAAGTTGAAATCCCGAAAAGACTGAGCAGTGATGAGAGAAAGGTTATTGAGGAATTAGCTGATTTAAGCCAAGGTAAGACTGCAACCAGTAAGAGATAA 1320 0.4371 MAITPFGSTSAAQWGIHPQLSLRSSMTGKIASSSHNVISRVSFMGAPSSSFLSRISVHHTLSSVGSSQTLHSRRGSRLTVRANADYYSVLGVSKNANKSEIKSAYRKLARNYHPDVNKEPGAEDKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSGMNPGDFSNPFDLFEQLFDNMNRGSGRGPYNGPVDGEDEYYSLLLNFKEAVFGVEKEIEISRLESCGTCNGSGAKPGTTPSRCNTCGGQGRVVSSTRTPLGVFQQQMTCSTCNGTGEISTPCNTCSGDGRVRKPKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFAVVEVIPDPVLKRDDTNILYTCKISYIDAILGTTIKVPTVDGMVDLKVPTGTQPNTTLVLAKKGVPLLNKKNMRGDQLVRVQVEIPKRLSSDERKVIEELADLSQGKTATSKR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1817 439 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 344 IPR008971 GO:0006457|GO:0051082
Lan1g1817 439 Pfam DnaJ domain 85 146 IPR001623 -
Lan1g1817 439 Hamap Chaperone protein DnaJ [dnaJ]. 82 435 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan1g1817 439 PANTHER BNAA01G34580D PROTEIN 30 439 - -
Lan1g1817 439 CDD DnaJ_C 193 415 - -
Lan1g1817 439 ProSitePatterns Nt-dnaJ domain signature. 126 145 IPR018253 -
Lan1g1817 439 SMART dnaj_3 84 141 IPR001623 -
Lan1g1817 439 Gene3D DnaJ domain 82 184 IPR036869 -
Lan1g1817 439 Gene3D - 332 439 - -
Lan1g1817 439 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 439 - -
Lan1g1817 439 ProSiteProfiles Zinc finger CR-type profile. 209 290 IPR001305 GO:0031072|GO:0051082
Lan1g1817 439 Pfam DnaJ central domain 222 285 IPR001305 GO:0031072|GO:0051082
Lan1g1817 439 PRINTS DnaJ domain signature 87 105 IPR001623 -
Lan1g1817 439 PRINTS DnaJ domain signature 105 120 IPR001623 -
Lan1g1817 439 PRINTS DnaJ domain signature 121 141 IPR001623 -
Lan1g1817 439 PRINTS DnaJ domain signature 141 160 IPR001623 -
Lan1g1817 439 CDD DnaJ_zf 222 285 IPR001305 GO:0031072|GO:0051082
Lan1g1817 439 Pfam DnaJ C terminal domain 197 412 IPR002939 -
Lan1g1817 439 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 209 289 IPR036410 -
Lan1g1817 439 SUPERFAMILY HSP40/DnaJ peptide-binding domain 337 423 IPR008971 GO:0006457|GO:0051082
Lan1g1817 439 Gene3D - 222 285 - -
Lan1g1817 439 CDD DnaJ 85 138 IPR001623 -
Lan1g1817 439 TIGRFAM DnaJ_bact: chaperone protein DnaJ 85 428 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan1g1817 439 Gene3D - 192 327 - -
Lan1g1817 439 ProSiteProfiles dnaJ domain profile. 85 149 IPR001623 -
Lan1g1817 439 SUPERFAMILY Chaperone J-domain 81 179 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1817 Lan-Chr1 33029023 33036361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1817 86 146 C2H2 Transcription Factor Family AT1G74250 46.269 7.37e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1817 K03686 - gmx:100811006 762.296