Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1808 ATGTCGAAACCATGGGGTAATATCGGAGCCTGGGCCGCAGACTCGGAACGTGCCGAAGCTGAAGAACGTGAAGCCGAAGCTGTAGTGGAAACCGCCGCATCAAAAAACTTCCCGAGCCTGAAGGAAGCTGTGAACGCTAAACAACCTAAAAAGAAGAAGATGACGTTATCTGAGTTCAGCAATTTCGCTGCCGGTGGTGGTGGTGGTTCGTCGGAGTACCGTGGCTTGACGACGGATGAGATGCTCCGCCTTCCAACTGGTCCTAAGGAGCGTTCTGCGGAGGAAATGCAGTTCAGCCGCGGTGGATTTTCGTCTTACGGTCGCTCCGGTGGACCTTCGAGAGATAGAGATGATAATCGCGATGGTTCTTGGGGCGGAGGGAGAAGATCTTATGGTGGATTTGATGAGGAGCCACGCAGAGGGAATAGTTCTAGGGTTTCGGAATTGGATCAGCCTTCGAGAGCTGACGAGGTTGATAATTGGGCGTCTGTGAAGAAATCTCTGCCGTCGTTCGATTCCGGGAGGCAAAATCGGTATGGTTCGCTCGGTGGTGGTGGCGGTGACCGCGATGGCGGTTTTGGTGGTGGTTCTAGAGGTGATGGCGGTTTTGGTGGTGGCTCTAGAGGTGATGGCGGTTTTGGCGGTGGCTCTAGAGGAGATGGCGGTTTTGGCGGTGGCTCTAGAGGAGATGACGGCTTTGGTGGTGGCTCTAGAGGTGATGGCGGTTTTGGCGGTGGTTCTAGAGGTGATGGCGGTTTTGGCGGTGGTTTTAGGGCTGATGGTGTGGATAACTGGGCGGCTGGGAAGAAGCCGGTTCCTGCTAGATCTTCCAACTCCGGATCTTCCAACTTTGGTTCTGGTTTTCGTGATTCCGGCATGGAGCCTGATCGCTGGGCGAGGGGTACACCACTGCCGCAGCGTGAGGAGCGGGAGCGCCCGAGGTTGGTATTAGATCCACGTAAAAGTGGCGTTGGTTCTGTGAATGAAGCTCCGGTGAAGACGAACAAGTCAAATCCATTTGGTGCGGCGAGGCCCAGGGAGGAGGTCTTGGCTGAGAAGGGATTGGATTGGAAGAAGCTGGATTCAGAGCTTGAGGCGAAGAAGCCGACGAGTCGCCCCACGAGTTCACACTCCAGCAGGCCTTCTAGTGCTCAATCTAGTCGTTCCGAGGGTCCAGGATTTCAGGGTGCAGAGGGTGTGGTGAAATCCAGACCCAAGGTCAATCCTTTTGGGGATGCCAAACCTAGGGAGGTTTTGCTCCGTGTTGAGAGGCCTGAGACTGAGGAGGAAAAATTGTTACATGAAGAAATTGATCAATTGAAGAAGGAACTTGAGAAAGAGTATACAACAAATTCAAATAAGGAATCTGTGGGTGGGGCTGGTGTAGACCACACTAGTGCAATCTTACTAAAGAAAGAAAGGGAGCTGGAACTTCTTATCCATGACTTGGATGACAAAGTTCGCTTTGGTCAGAAAGCCGTTGATAGGCCAGATTCCTCAGCAGGAAAGAGTGCTGGTTTTCCTGATAGGCCGCCTTCTCAATCTGGCTTGTTTGAGGATACTAGAAGTGTGGAGTTTAATGACAGACCTCGATCCCGTGGCACAGGAGATACGTCGATGCGACCTAGTGATGATAGAAGACCATATCAAGGTAGCAGGGAAAGAGGATGGTTTTCGGGTAGCAGAGACTTGAACAGTTCAAGGTCAAGAGACAGATGGTGA 1722 0.5232 MSKPWGNIGAWAADSERAEAEEREAEAVVETAASKNFPSLKEAVNAKQPKKKKMTLSEFSNFAAGGGGGSSEYRGLTTDEMLRLPTGPKERSAEEMQFSRGGFSSYGRSGGPSRDRDDNRDGSWGGGRRSYGGFDEEPRRGNSSRVSELDQPSRADEVDNWASVKKSLPSFDSGRQNRYGSLGGGGGDRDGGFGGGSRGDGGFGGGSRGDGGFGGGSRGDGGFGGGSRGDDGFGGGSRGDGGFGGGSRGDGGFGGGFRADGVDNWAAGKKPVPARSSNSGSSNFGSGFRDSGMEPDRWARGTPLPQREERERPRLVLDPRKSGVGSVNEAPVKTNKSNPFGAARPREEVLAEKGLDWKKLDSELEAKKPTSRPTSSHSSRPSSAQSSRSEGPGFQGAEGVVKSRPKVNPFGDAKPREVLLRVERPETEEEKLLHEEIDQLKKELEKEYTTNSNKESVGGAGVDHTSAILLKKERELELLIHDLDDKVRFGQKAVDRPDSSAGKSAGFPDRPPSQSGLFEDTRSVEFNDRPRSRGTGDTSMRPSDDRRPYQGSRERGWFSGSRDLNSSRSRDRW* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1808 573 Coils Coil 427 447 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 274 288 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 346 370 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 487 573 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 293 318 - -
Lan1g1808 573 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 573 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 132 161 - -
Lan1g1808 573 Coils Coil 15 35 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 60 429 - -
Lan1g1808 573 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 573 IPR010433 GO:0003743
Lan1g1808 573 Pfam Plant specific eukaryotic initiation factor 4B 1 556 IPR010433 GO:0003743
Lan1g1808 573 MobiDBLite consensus disorder prediction 371 392 - -
Lan1g1808 573 MobiDBLite consensus disorder prediction 522 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1808 Lan-Chr1 32860253 32866631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1808 258 573 Eukaryotic Initiation Factors Gene Family AT3G26400 52.770 3.00e-89 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1808 - - lang:109361113 541.576