Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1807 ATGGGAGTCTTCACATTCGTCCTCCGCCACTCCAACGGCGAATGGAAAGCCAAGCAACACTCCGGCGACATCGAAGCCTCCGCCGCCTCCACCTTCGCCATCCAACGGTCGCTTGTTAATGCCGTTCTCGCCGTTGATGCTTCCGGTGGCGTTCAGTCCTCTTTCTCCACCGTTTCACCTACCTCCGCTGTTTTCCAGGTTATTGTGGGTGGTGCTGCAATTGTTGGTGGTGGTGTTGCTGCTGCTCCAGCAGGTGCTGCCCCTGCTGCTGAGGCTGCAGCTCCTGCCAAGAAAGAAGAAAAGGTCGAGGAAGAAGAGGATGAAGAAGAGTTTGGATTGTCACTTTTCGATTAA 354 0.548 MGVFTFVLRHSNGEWKAKQHSGDIEASAASTFAIQRSLVNAVLAVDASGGVQSSFSTVSPTSAVFQVIVGGAAIVGGGVAAAPAGAAPAAEAAAPAKKEEKVEEEEDEEEFGLSLFD* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1807 117 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 117 IPR044252 GO:0003735|GO:0005840
Lan1g1807 117 MobiDBLite consensus disorder prediction 102 117 - -
Lan1g1807 117 Pfam 60s Acidic ribosomal protein 66 116 - -
Lan1g1807 117 MobiDBLite consensus disorder prediction 93 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1807 Lan-Chr1 32839406 32840929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1807 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 66.667 8.83e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1807 K02942 - gmx:100804776 108.997