Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1806 ATGTCAGGTGAAGAAGAGGGTAAGGACTCTGCCGGTGGTGGTCACCGGAGAACATATTCCCGGTCAGTTTCATGGACTGATCGAGCTCCGGCGAGCCGAAAGCCGCATAACAAGCCAAGGTCATTGCTGGCATCACTTCAGCCCTTATCAATTAACAAAAACAGTGTTCAGGAGTGGCCAAGTGCTGGATCTGATGACCTTGGAGTTTGGCCACTTCCTCAGACTCCAAAAGGGTCAATCAGATCCACTGAATTGGGTTCTATGAATGAGTTTCAGTTCAAGAGAGATAAACTTGCATTCTATGACAAAGAGTGTTCTAGAATTGCTGACCATGTGTACCTTGGAAGTGACACAGTTGCAAAGAATCATGAGCTTTTGAGGCAGAATGGGATCACTCATGTTCTTAATTGTGTTGGTTTTGTTTGCCCTGAATATTTCAAGAGTGATTTTGTGTATAAAACTCTTTGGTTGAAGGATAGTCCGACCGAGGACATTACCAGTATTCTGTATGATGTTTTTGATTACTTTGAGGATGTTAGGGAACAACGTGGTCGTGTCCTTGTTCATTGCTGCCGAGGGGTTTCGAGATCAACGTCGTTGGTGATTGCATATATCATGTGGAGGGAGGGTCAGAGCTTTGAAGATGCTTTTCAGTATGTGAAAAATGCAAGAGGTGTTACCAATCCAAACATGGGTTTTGCTAGTCAACTCCTTCAGTGTCAGAAAAGGGTACATGCTATGCCTGCTAGTCCTAAATCTATTCTTAGAATGTATAGAATGGCTCCTCATTCACCTTATGACCCTCTTCATTTGGTTCCCAAAATGGTGAACCAGCCGTGTGCACAAGCACTTGATTCTCGTGGTGCTTTTATTATCCATGTTCCTTCTGCTGTATATGTATGGACTGGTAAGAATTGTAATTGTGTCATGTCTTGTAATGCAAAATCAGCAGCCGATCAGGTCATACGTTACGAGAGGGCCAGAGGTCCAGTTCTTATGATCCATGAAGATGAGGAGCCACCGGATTTTTGGATTGCTCTTTCCAATGAGCAATTGTTATCAGGTAATTGTGATAAAGCTGAGGTCAAGCAGGATACAACATTGGCTTCTTCTGCAAGAATGGAGATTGATGATGGAGTCCATAATTGGATTCGTCCAAGGAAAGTAGATGAATATGATTTGGATTTTGAGATTTTTCACAAGGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCTGTATCTAATGATGAATCAGAGACTTGCCTTCCCACTAGAGAAAACAGTTGGGGAAGATTGAGGAGAAAGCTTGCTAGCGGTCTCATGAAAGGATTGTTCCCGTCCTGCAAAAACACAAACTCATCCAAAGCCGAATCGGGCTTGATCATGGAAGAAGAAAAACAACACTCTCTTGTCGATCCTTCATCACCATCATCAAACCATCCTTGTGGTTCACCGGATTCATTTGAGTGTTTTCCAGATAACAGCTCAGACAGGGCAAAAGATACACTTGAAGTCATGGACCACTTTGTTCCTAGTGTTGATTCATCGCTGCCACCATCTCCTGGAGGAATGTCCGATTCTTATGCTTTTTTTCTTAGCAATAGCCGAAAACTCAGTTCCAAGTCGCCGACATTTTCGCCTTCAAGTTCTGATTATGCTAGCTCATTTACATTTTCACCTTCATCAACAAACTGGTCTTCTCGGTTGCCATCACCTTCTAGCCTAGAATCAACCGAAGCCTTTTATGGTAAAGATGCATCTTTAGTAGATGGTTTCTTTTCACTTCAGAAAGAAGCCGTCTCTTCACCTTCAGAGGCATATTCGGCTAACCACTCATTGGGAAGAGCAGACTTCTATTTGCGGAGTAAAGGATCTTCACCCTCCATTGCAGAGCGCAGAGGGAGCAATCTGCCACCTCACATGGTGCTACCCTCGGTCAATGAATCACCCCGCGACCACAAGGCCTTGGTAAGGTCACAGTCGTTCTCCCTACCTGATTTGAATGATAATTTGAATAAGGATGTTAGCTCCAACCTCCGAACAATGTGA 2049 0.4373 MSGEEEGKDSAGGGHRRTYSRSVSWTDRAPASRKPHNKPRSLLASLQPLSINKNSVQEWPSAGSDDLGVWPLPQTPKGSIRSTELGSMNEFQFKRDKLAFYDKECSRIADHVYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLKDSPTEDITSILYDVFDYFEDVREQRGRVLVHCCRGVSRSTSLVIAYIMWREGQSFEDAFQYVKNARGVTNPNMGFASQLLQCQKRVHAMPASPKSILRMYRMAPHSPYDPLHLVPKMVNQPCAQALDSRGAFIIHVPSAVYVWTGKNCNCVMSCNAKSAADQVIRYERARGPVLMIHEDEEPPDFWIALSNEQLLSGNCDKAEVKQDTTLASSARMEIDDGVHNWIRPRKVDEYDLDFEIFHKALAGGVVPPFSVSNDESETCLPTRENSWGRLRRKLASGLMKGLFPSCKNTNSSKAESGLIMEEEKQHSLVDPSSPSSNHPCGSPDSFECFPDNSSDRAKDTLEVMDHFVPSVDSSLPPSPGGMSDSYAFFLSNSRKLSSKSPTFSPSSSDYASSFTFSPSSTNWSSRLPSPSSLESTEAFYGKDASLVDGFFSLQKEAVSSPSEAYSANHSLGRADFYLRSKGSSPSIAERRGSNLPPHMVLPSVNESPRDHKALVRSQSFSLPDLNDNLNKDVSSNLRTM* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1806 682 CDD DSP 105 239 - -
Lan1g1806 682 SUPERFAMILY Actin depolymerizing proteins 250 349 - -
Lan1g1806 682 MobiDBLite consensus disorder prediction 1 15 - -
Lan1g1806 682 Gene3D Protein tyrosine phosphatase superfamily 76 246 IPR029021 -
Lan1g1806 682 MobiDBLite consensus disorder prediction 625 654 - -
Lan1g1806 682 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 652 - -
Lan1g1806 682 Gene3D Severin 256 353 IPR029006 -
Lan1g1806 682 PANTHER MKPA PROTEIN 1 652 - -
Lan1g1806 682 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 224 IPR000387 GO:0016311|GO:0016791
Lan1g1806 682 MobiDBLite consensus disorder prediction 1 46 - -
Lan1g1806 682 SMART dsp_5 104 243 IPR020422 GO:0006470|GO:0008138
Lan1g1806 682 ProSitePatterns Tyrosine specific protein phosphatases active site. 188 198 IPR016130 GO:0016311|GO:0016791
Lan1g1806 682 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 246 IPR020422 GO:0006470|GO:0008138
Lan1g1806 682 MobiDBLite consensus disorder prediction 451 486 - -
Lan1g1806 682 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 95 246 IPR029021 -
Lan1g1806 682 Pfam Dual specificity phosphatase, catalytic domain 112 242 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1806 Lan-Chr1 32834699 32837596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1806 1 140 Protein tyrosine phosphatase (PTP) family AT3G55270 39.459 2.48e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1806 - - lja:Lj6g3v0574850.1 857.055