Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1803 ATGTTTTTGTTTTCTCACTTACTTCTTCATTCAGCCTTATTAATCATTCTCTTCCCATTTATTTTTCACAACCTTATAGTTGGTGTATCATCAACCACTTTAAGCATTAACACAGATAAAGAAGCCTTAATCTCATTGAAGTCTGAACTGAATGATGAAACTTCTAACCAATTATCTTCTTGGAGCCAGAACTCATCCCCTTGCAATTGGACTGGTGTCCTATGCAACAACCTTAGAGAAAGAGTCACTGGCCTAGATCTTTCAGGTTTAGGACTCTCAGGTCAGTTAAGTCCTTATATTGGTAACCTGTCCTATCTTGAGTCCCTCCAGTTGCAGGGTAACCAATTCATAGGAGTGGTTCCTGATCAAATTGGCAATCTATTAAGGTTGAGAGTTCTAAATATGAACTCCAACAGAATAGAAGGAATGCTTCCTTCAAACATCACCAACTTGGTTGAGCTTCAGATTCTTGATCTATCTTTGAACATGATTGTAAGCAGAATTCCTGAAGATATCAGCAACTTGAGTAAGCTTCAAGTGTTGAAACTTGGAGGGAATAGCTTCTATGGTGCAATACCTGAAACTATAGGAAACATTTCTTCTCTCAAGAATATCAGTTTCGGCACCAACTCTCTCAGTGGTTTGATTCCAAGTGAGTTAGGTAGGCTCAGCAATTTAATTGAGCTTGATCTCACTATCAACAATCTCACTGGCACTATTCCACAAGCTATATATAACCTATCTTCTCTAGTTAACTTGGCCGTAGCTTCGAACTCGTTGTGGGGTGAGATTCCTTATGATGTTGGCCTTAAACTTCCAAAACTCCTAGTGTTCAATTTTTGCATCAATAAATTCACAGGTAGAATTCCAGGATCTTTGCACAACCTTACCAATATTAGGGTCATCAGAATGGCTAACAACCTTTTGGAAGGAACAGTGCCACCAGGTTTAGGGAACCTCCCATCCCTTCACATGTATAATATTGGTAAAAACAGGATAGTTAGTTCAGGAGACAGAGGTCTAGACTTTATTACCTCTTTGACAAACAGCACATTCTTGAACTTTCTCGCAATCGACGAAAATAGGCTTGAAGGTGTGATTCCTGAGTCAATTGGCAATCTCTCCAAGGATCTCTCAAATCTATACATGGGAGGGAATCGTTTCAATGGAAGCATACCAACCTCCATCGGTAATCTTAGTGGCTTGAAGTTGTTAAACCTGAGTTACAATTCCATCACCGGAGATATCCCACATGAGTTAGCCCAATTGGAGGAACTAAGAGAGCTATCGCTTGCTGGAAATCAGTTATCAGGAAGTATTCCAAACTCCCTCGGCAATCTCATAAACTTGATCAATATTGATTTGTCAAGAAATGAACTTGTTGGTGAAATTCCCACCAGTTTCGGAAATTTTCAAAACCTTATCTTTATGGACTTATCCAGAAACAAACTCAATGGAAGCATACCTAAAGAAATCCTCAACCTCCCAACTTTAAGCAAAGTCTTAAATTTGTCTGTGAACTTGTTGAGTGGTCCAATACCTCAAGTTGGGAATTTGATTGGTGTTGCCACCATTGACTTCTCTAACAACCAATTGTCTGGTGGCATTCCTAGCTCATTCAGCAATTGTCGGAGCTTGGAAAACTTGTTTTTGTCCAGGAATATGCTTTCAGGTTCCATTCCAAAAACTCTTGGATATTTGAGAGGTTTGGTAAATTTGGACCTCTCCTCCAACCAACTCACTGGATCCATTCCTACTGAACTTCAAAATCTACATGTCCTTCACCTTTTGAACCTCTCTTATAATGATTTAGAAGGAGCCATTCCCAGTGGTGGAGTTTTCCAAAATCCCTCATATGTTCACTTAGAAGGCAATGGAAAACTGTGCTTGGATTTGTCATGTGTGCCTCATGGCAGTGGAAGAAGGAATGTCAAACTTTACATCATCATAGCCACAGTGGTAACATTGATACTATGTCTTACAATTGGCTTGGTCCTATACATAATAAAGAACAGAAAAGTGAAGGTAACAGCAGCGCAATCATCTGACCTGCTCAATTCTCGTATTCCAATGGTCTCTTATGATGAGCTTCGTCGCGCAACCGAGGAATTCAGCCAAGAAAACTTATTAGGAGTTGGCAGTTTTGGCTCAGTCTACATAGGCCATCTAAGCCAATTGAATACTGTTGCAGTTAAAGTGCTTGACACTCTAAGAACCGGTTCTTTGAAGAGTTTCTTTGCAGAGTGTGAAGCTCTAAAGAACACGAGACATCGGAATCTGGTTAAGCTTATTACATCATGCTCTAGTGTTGACATAAAAAACAATGAATTTCTTGCTCTTGTTTATGAGTACTTAAGCAATGGAAGCTTGGAAGATTGGATCAAGGGGAAGAGAAAACATGCAAATGGGAATGGTTTGAACCTTATGGAGAGACTGAATATAGCTATTGATGCTGCTTGTGCAATGGATTATCTGCACAATGAAAGTCAAGTTCCTATTGTGCATTGCGATTTGAAGCCTAGCAACATTCTCTTGGACGAAGATATGACTGCAAAGGTCGGAGATTTCGGATTGGCTAGGTTGCTGATTCAAAGTTCAGCTAATCAAGTCTCCATTAGCTCCGCTCATGTTCTTAGAGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGGGAGAAACCATCTGCAGCTGGAGATGTATACAGTTTCGGAGTAGTTTTACTAGAGCTCTTCTCAGGGAAAAGTCCTACAGATGAAAGCTTTACAGGAGGCTTAAGCCTAACAAGATTTGTTCAATCAGCATTCAAAGACAACACTGTGCAAGTCATTGACCCTCAGCTACTATCACTTATTTTTCATGATGATGATGACCCTTCCAATGCCAAAGGTCCTAATCCACAACTCCATTGTGTAGATGCAATTCTAAGGGTTGCCTTATCTTGCACTGCAGACAATCCTGATGAACGCATCGATATAAAGGACGTTGTTCACCAATTAAAAGCTACTAGAGACTCTCTTATGAAACAATATGAGATTAAGAGTCCTTCTCCTACTAGTGAACATTACTTAGAAGTTTCAATTAAATGA 3090 0.3984 MFLFSHLLLHSALLIILFPFIFHNLIVGVSSTTLSINTDKEALISLKSELNDETSNQLSSWSQNSSPCNWTGVLCNNLRERVTGLDLSGLGLSGQLSPYIGNLSYLESLQLQGNQFIGVVPDQIGNLLRLRVLNMNSNRIEGMLPSNITNLVELQILDLSLNMIVSRIPEDISNLSKLQVLKLGGNSFYGAIPETIGNISSLKNISFGTNSLSGLIPSELGRLSNLIELDLTINNLTGTIPQAIYNLSSLVNLAVASNSLWGEIPYDVGLKLPKLLVFNFCINKFTGRIPGSLHNLTNIRVIRMANNLLEGTVPPGLGNLPSLHMYNIGKNRIVSSGDRGLDFITSLTNSTFLNFLAIDENRLEGVIPESIGNLSKDLSNLYMGGNRFNGSIPTSIGNLSGLKLLNLSYNSITGDIPHELAQLEELRELSLAGNQLSGSIPNSLGNLINLINIDLSRNELVGEIPTSFGNFQNLIFMDLSRNKLNGSIPKEILNLPTLSKVLNLSVNLLSGPIPQVGNLIGVATIDFSNNQLSGGIPSSFSNCRSLENLFLSRNMLSGSIPKTLGYLRGLVNLDLSSNQLTGSIPTELQNLHVLHLLNLSYNDLEGAIPSGGVFQNPSYVHLEGNGKLCLDLSCVPHGSGRRNVKLYIIIATVVTLILCLTIGLVLYIIKNRKVKVTAAQSSDLLNSRIPMVSYDELRRATEEFSQENLLGVGSFGSVYIGHLSQLNTVAVKVLDTLRTGSLKSFFAECEALKNTRHRNLVKLITSCSSVDIKNNEFLALVYEYLSNGSLEDWIKGKRKHANGNGLNLMERLNIAIDAACAMDYLHNESQVPIVHCDLKPSNILLDEDMTAKVGDFGLARLLIQSSANQVSISSAHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGVVLLELFSGKSPTDESFTGGLSLTRFVQSAFKDNTVQVIDPQLLSLIFHDDDDPSNAKGPNPQLHCVDAILRVALSCTADNPDERIDIKDVVHQLKATRDSLMKQYEIKSPSPTSEHYLEVSIK* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1803 1029 ProSiteProfiles Protein kinase domain profile. 704 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1803 1029 SMART LRR_typ_2 151 175 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 423 447 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 296 320 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 471 495 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 591 616 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 223 247 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 399 422 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 567 590 IPR003591 -
Lan1g1803 1029 SMART LRR_typ_2 127 150 IPR003591 -
Lan1g1803 1029 Gene3D Ribonuclease Inhibitor 35 195 IPR032675 -
Lan1g1803 1029 SMART serkin_6 704 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1803 1029 SUPERFAMILY L domain-like 37 334 - -
Lan1g1803 1029 Pfam Leucine rich repeat 378 436 IPR001611 GO:0005515
Lan1g1803 1029 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Lan1g1803 1029 Pfam Protein tyrosine and serine/threonine kinase 707 1000 IPR001245 GO:0004672|GO:0006468
Lan1g1803 1029 Gene3D Ribonuclease Inhibitor 339 634 IPR032675 -
Lan1g1803 1029 SMART LRR_sd22_2 223 249 - -
Lan1g1803 1029 SMART LRR_sd22_2 423 449 - -
Lan1g1803 1029 SMART LRR_sd22_2 375 401 - -
Lan1g1803 1029 SMART LRR_sd22_2 567 593 - -
Lan1g1803 1029 SMART LRR_sd22_2 151 177 - -
Lan1g1803 1029 SUPERFAMILY Protein kinase-like (PK-like) 684 1000 IPR011009 -
Lan1g1803 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Lan1g1803 1029 SUPERFAMILY L domain-like 378 629 - -
Lan1g1803 1029 Gene3D Ribonuclease Inhibitor 202 338 IPR032675 -
Lan1g1803 1029 CDD STKc_IRAK 710 1001 - -
Lan1g1803 1029 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1007 - -
Lan1g1803 1029 ProSitePatterns Protein kinases ATP-binding region signature. 710 732 IPR017441 GO:0005524
Lan1g1803 1029 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Lan1g1803 1029 Gene3D Phosphorylase Kinase; domain 1 685 784 - -
Lan1g1803 1029 PANTHER OS04G0122200 PROTEIN 25 1007 - -
Lan1g1803 1029 Gene3D Transferase(Phosphotransferase) domain 1 785 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1803 Lan-Chr1 32803912 32807802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1803 38 1009 Receptor kinase-like Gene Family AT3G47570 41.608 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan1g1803 PK_Tyr_Ser-Thr 8.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1803 - - gmx:100783512 1489.94